RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ANKRD36A6QL64 1941 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 VPS13AQ96RL7 3174 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 A0A1W2PP55 124 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 LRRC72A6NJI9 287 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 CES2O00748 559 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 KCNK3O14649 394 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 MUSKO15146 869 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 MAP3K13O43283 966 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 AP1G1O43747 822 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 NDUFS2O75306 463 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 RNASEH2AO75792 299 aaKnown RBP17.88■□□□□ 0.45
CTNS-203ENST00000399306 MAP3K6O95382 1288 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 SERPINA4P29622 427 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 RGRP47804 291 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 NEK3P51956 506 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 OTUD4Q01804 1114 aaKnown RBP17.88■□□□□ 0.45
CTNS-203ENST00000399306 AP1B1Q10567 949 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 ZNF211Q13398 564 aaPredicted RBP17.88■□□□□ 0.45
CTNS-203ENST00000399306 SLC14A2Q15849 920 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 TEX44Q53QW1 395 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 ZNF569Q5MCW4 686 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 LAIR1Q6GTX8 287 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 NCEH1Q6PIU2 408 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 BRAT1Q6PJG6 821 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 ERN2Q76MJ5 926 aaKnown RBP17.88■□□□□ 0.45
CTNS-203ENST00000399306 SLC13A5Q86YT5 568 aaPredicted RBP17.88■□□□□ 0.45
CTNS-203ENST00000399306 PGBD5Q8N414 524 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 OR2T34Q8NGX1 318 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 ACTL9Q8TC94 416 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 GRIN3AQ8TCU5 1115 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 ECHDC3Q96DC8 303 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 ERLEC1Q96DZ1 483 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 PBKQ96KB5 322 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 NEUROG2Q9H2A3 272 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 SUV39H2Q9H5I1 410 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 PREBQ9HCU5 417 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 SAE1Q9UBE0 346 aaPredicted RBP17.88■□□□□ 0.45
CTNS-203ENST00000399306 PCDHGA5Q9Y5G8 931 aa17.88■□□□□ 0.45
CTNS-203ENST00000399306 OTOGLQ3ZCN5 2332 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 BCLAF3A2AJT9 711 aaKnown RBP17.87■□□□□ 0.45
CTNS-203ENST00000399306 INSIG1O15503 277 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 HTRA2O43464 458 aaPredicted RBP17.87■□□□□ 0.45
CTNS-203ENST00000399306 PLRG1O43660 514 aaKnown RBP17.87■□□□□ 0.45
CTNS-203ENST00000399306 NEBLO76041 1014 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 SEMA4FO95754 770 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 LMNAP02545 664 aaKnown RBP17.87■□□□□ 0.45
CTNS-203ENST00000399306 BCKDHBP21953 392 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 HOXD12P35452 270 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 NUDT1P36639 197 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 SCNN1BP51168 640 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 BCL2L1Q07817 233 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 CNTN1Q12860 1018 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 SRSF5Q13243 272 aaKnown RBP17.87■□□□□ 0.45
CTNS-203ENST00000399306 PIP5KL1Q5T9C9 394 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 AGBL4Q5VU57 503 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 AADACL2Q6P093 401 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 CDKL3Q8IVW4 592 aaPredicted RBP17.87■□□□□ 0.45
CTNS-203ENST00000399306 GANCQ8TET4 914 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 NKD2Q969F2 451 aaPredicted RBP17.87■□□□□ 0.45
CTNS-203ENST00000399306 ARRDC3Q96B67 414 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 EXOC2Q96KP1 924 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 NT5MQ9NPB1 228 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 SCUBE2Q9NQ36 999 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 SERGEFQ9UGK8 458 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 TRHDEQ9UKU6 1024 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 TTC7AQ9ULT0 858 aaPredicted RBP17.87■□□□□ 0.45
CTNS-203ENST00000399306 SMG5Q9UPR3 1016 aaKnown RBP17.87■□□□□ 0.45
CTNS-203ENST00000399306 GON4LQ3T8J9 2241 aa17.87■□□□□ 0.45
CTNS-203ENST00000399306 SDK1Q7Z5N4 2213 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 GPR179Q6PRD1 2367 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 C16orf96A6NNT2 1141 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 METTL12A8MUP2 240 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 KCNK1O00180 336 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 JCHAINP01591 159 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 UGT2B4P06133 528 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 RBP3P10745 1247 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 ADRB3P13945 408 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 ACSL1P33121 698 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 CCR5P51681 352 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 ADPRHP54922 357 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 POLR2LP62875 67 aaKnown RBP17.86■□□□□ 0.45
CTNS-203ENST00000399306 RPL6Q02878 288 aaKnown RBP17.86■□□□□ 0.45
CTNS-203ENST00000399306 LLGL1Q15334 1064 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 CACUL1Q86Y37 369 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 SLC35F6Q8N357 371 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 FAM160A2Q8N612 972 aaPredicted RBP17.86■□□□□ 0.45
CTNS-203ENST00000399306 OR6K2Q8NGY2 324 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 HTR3CQ8WXA8 447 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 TEKT5Q96M29 485 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 KLHL32Q96NJ5 620 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 CD93Q9NPY3 652 aa17.86■□□□□ 0.45
CTNS-203ENST00000399306 TNRC6BQ9UPQ9 1833 aaKnown RBP17.86■□□□□ 0.45
CTNS-203ENST00000399306 DMDP11532 3685 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 CFAP69A5D8W1 941 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 USP27XA6NNY8 438 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 H7C0C1 242 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 TRAFD1O14545 582 aaPredicted RBP17.85■□□□□ 0.45
CTNS-203ENST00000399306 LRP3O75074 770 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 EPN2O95208 641 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 HLA-DQB2P05538 268 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms