RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 KLHL17Q6TDP4 642 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 CATSPERGQ6ZRH7 1159 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 LRRC55Q6ZSA7 311 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 MARK2Q7KZI7 788 aaKnown RBP8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 EEF1AKMT1Q8WVE0 214 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 CHST7Q9NS84 486 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 ATP6V1HQ9UI12 483 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 GSAPA4D1B5 854 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 SLC15A5A6NIM6 579 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 ALOX15BO15296 676 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 FGRP09769 529 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 PSMB4P28070 264 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 PNLIPRP1P54315 467 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 SLC39A12Q504Y0 691 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 IRAK1BP1Q5VVH5 260 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 WDR59Q6PJI9 974 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 POTEHQ6S545 545 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 GPRIN3Q6ZVF9 776 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 TIFAQ96CG3 184 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 ARL15Q9NXU5 204 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 PNMA8BQ9ULN7 279 aaPredicted RBP8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 RAB26Q9ULW5 256 aa8.44□□□□□ -1.06
SPTLC3-201ENST00000399002 IFT172Q9UG01 1749 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 H3BN98 237 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 DCXO43602 365 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 PROCP04070 461 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 TPP2P29144 1249 aaPredicted RBP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 GRIA4P48058 902 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 OLR1P78380 273 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 TRAP1Q12931 704 aaKnown RBP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 FNDC3BQ53EP0 1204 aaKnown RBP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 MACC1Q6ZN28 852 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 KIAA0408Q6ZU52 694 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 FBXW8Q8N3Y1 598 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 PIK3C3Q8NEB9 887 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 CSGALNACT1Q8TDX6 532 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 KAT2BQ92831 832 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 SLC47A1Q96FL8 570 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 MLPHQ9BV36 600 aaPredicted RBP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 RHOBTB2Q9BYZ6 727 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 PAIP1Q9H074 479 aaKnown RBP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 ZCWPW1Q9H0M4 648 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 C1QTNF3-AMACRE9PGA6 284 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 KLRC4O43908 158 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 PCDH8O95206 1070 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 CRHR1P34998 444 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 TSEN2Q8NCE0 465 aaKnown RBP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 ZSWIM2Q8NEG5 633 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 UBP1Q9NZI7 540 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 RIC1Q4ADV7 1423 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 UBE2QL1A1L167 161 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 PIPSLA2A3N6 862 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 CCDC182A6NF36 153 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 OR6A2O95222 327 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 HIST1H2ABP04908 130 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 TPH1P17752 444 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 ALOX12P18054 663 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 CSNK2BP67870 215 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 SULT2A1Q06520 285 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 RGS1Q08116 209 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 LGALS3BPQ08380 585 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 NR1D2Q14995 579 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 FAM171A1Q5VUB5 890 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 MFSD5Q6N075 450 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 HIST3H2AQ7L7L0 130 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 SFRP1Q8N474 314 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 OR7A2PQ8NGA2 310 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 SHC3Q92529 594 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 EDEM1Q92611 657 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 HIST1H2ACQ93077 130 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 CLK4Q9HAZ1 481 aaKnown RBP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNF180Q9UJW8 692 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 PCDHB1Q9Y5F3 818 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 STON1Q9Y6Q2 735 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 SNPHO15079 494 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 CBFA2T3O75081 653 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 SASH3O75995 380 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 CCNB1P14635 433 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 PTGES3Q15185 160 aaKnown RBP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 NEDD8Q15843 81 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 GJD3Q8N144 294 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNF614Q8N883 585 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNF607Q96SK3 696 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 ULBP1Q9BZM6 244 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 TIMMDC1Q9NPL8 285 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 OR12D3Q9UGF7 316 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 IKZF3Q9UKT9 509 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 SAMD4AQ9UPU9 718 aaKnown RBP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 DUOX1Q9NRD9 1551 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 MYOM1P52179 1685 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 USP17L7P0C7H9 530 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 UMPSP11172 480 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 MYL9P24844 172 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 ADORA2AP29274 412 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 HOXA10P31260 410 aaPredicted RBP8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 INHBEP58166 350 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 COPZ1P61923 177 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 MTM1Q13496 603 aa8.43□□□□□ -1.06
SPTLC3-201ENST00000399002 LACTB2Q53H82 288 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms