RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ATP13A3Q9H7F0 1226 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 BATF3Q9NR55 127 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 F8VP50 259 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 COX7A2P14406 83 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 RPA3P35244 121 aaPredicted RBP14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 HPCAL1P37235 193 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 SLC41A1Q8IVJ1 513 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 PRKD2Q9BZL6 878 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 PLK2Q9NYY3 685 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 CFAP97Q9P2B7 532 aa14.38□□□□□ -0.11
PCDHA11-201ENST00000398640 DNALI1O14645 258 aaPredicted RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 ERN1O75460 977 aaKnown RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 ZSCAN5DPP0CG00 497 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 GJA9P57773 515 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 COX10Q12887 443 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 RRP1BQ14684 758 aaKnown RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 FAM46CQ5VWP2 391 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 FAM45BPQ6NSW5 357 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 CYB5D1Q6P9G0 228 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 C11orf88Q6PI97 169 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 HJURPQ8NCD3 748 aaPredicted RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 NSMCE2Q96MF7 247 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 HSD17B14Q9BPX1 270 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 FANCEQ9HB96 536 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 VPS45Q9NRW7 570 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 SYN3O14994 580 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 PSMD8P48556 350 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 SERPINH1P50454 418 aaKnown RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 ARHGAP1Q07960 439 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 LDLRAD1Q5T700 205 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 POU5F2Q8N7G0 328 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 ASZ1Q8WWH4 475 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 OR8D1Q8WZ84 308 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 SPRTNQ9H040 489 aaPredicted RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 TRBV23OR9-2A0A075B6M9 112 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 MAGEA13PA6NCF6 341 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 TRIM43BA6NCK2 446 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 ARL5CA6NH57 179 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 GMFGO60234 142 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 KRT75O95678 551 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 ANXA5P08758 320 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 ABRQ12979 859 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 TMEM132CQ8N3T6 1108 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 KYQ8NBH2 561 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 C19orf18Q8NEA5 215 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 RNF145Q96MT1 663 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 SERHL2Q9H4I8 314 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 ACP6Q9NPH0 428 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 SERHLQ9NQF3 203 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 CCDC189A1A4V9 331 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 RGS14O43566 566 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 RARAP10276 462 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 PSMB4P28070 264 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 MIIPQ5JXC2 388 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 PAPD7Q5XG87 772 aaKnown RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 SLC30A9Q6PML9 568 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 EID3Q8N140 333 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 MTMR8Q96EF0 704 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 L2HGDHQ9H9P8 463 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 CROTQ9UKG9 612 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 NFATC1O95644 943 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 PAICSP22234 425 aaKnown RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 SRSF11Q05519 484 aaKnown RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 BIKQ13323 160 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 RBM43Q6ZSC3 357 aaKnown RBP14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 TBCBQ99426 244 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 BCL2L14Q9BZR8 327 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 AP4S1Q9Y587 144 aa14.37□□□□□ -0.11
PCDHA11-201ENST00000398640 H3BQF6 201 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 BANF1O75531 89 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 TALDO1P37837 337 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 FAAP100Q0VG06 881 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 C16orf46Q6P387 395 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 FAM183BPQ6ZVS7 135 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 HOMEZQ8IX15 550 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 ZBTB10Q96DT7 871 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 ALG9Q9H6U8 611 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 ANKZF1Q9H8Y5 726 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 KLQ9UEF7 1012 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 TRPM3Q9HCF6 1732 aaPredicted RBP14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 ZNF862O60290 1169 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 TRUB2O95900 331 aaKnown RBP14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 SERPINE1P05121 402 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 NTSP30990 170 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 TLX1P31314 330 aaPredicted RBP14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 GNA13Q14344 377 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 UBXN2BQ14CS0 331 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 WDR59Q6PJI9 974 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 IZUMO2Q6UXV1 221 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 FAM20CQ8IXL6 584 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 KLHL23Q8NBE8 558 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 GLIS3Q8NEA6 775 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 HDAC7Q8WUI4 952 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 ADPRHL2Q9NX46 363 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 OR10H1Q9Y4A9 318 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 ACADSP16219 412 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 FASP25445 335 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 CRATP43155 626 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 STX4Q12846 297 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms