RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SMG8Q8ND04 991 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TUBGCP3Q96CW5 907 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 FCRL2Q96LA5 508 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SLC2A13Q96QE2 648 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 KATNAL1Q9BW62 490 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 AASDHPPTQ9NRN7 309 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MKS1Q9NXB0 559 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 POMPQ9Y244 141 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 AP4B1Q9Y6B7 739 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MAGEB16A2A368 324 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 AHCYL1O43865 530 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 DLX3O60479 287 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GPR32O75388 356 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 AP2A1O95782 977 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ALDOAP04075 364 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PCSK1P29120 753 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 FMO4P31512 558 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 NIPAL4Q0D2K0 466 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 FASTKQ14296 549 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GALNT3Q14435 633 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PAFAH1B3Q15102 231 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CNGA3Q16281 694 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TAZQ16635 292 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 RARS2Q5T160 578 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CES4AQ5XG92 561 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 OVOS1Q6IE37 1185 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 LINC00523Q86TU6 105 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MAPK15Q8TD08 544 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 LRTOMTQ8WZ04 291 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PCED1BQ96HM7 432 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TEKT5Q96M29 485 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF778Q96MU6 729 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CYP2S1Q96SQ9 504 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CCT7Q99832 543 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 RTKNQ9BST9 563 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 UBE2OQ9C0C9 1292 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SIRPGQ9P1W8 387 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 AFF4Q9UHB7 1163 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 FAM50BQ9Y247 325 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ZCWPW2A0A1B0GU75 182 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 HEATR9A2RTY3 570 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MEIS3P2A8K0S8 358 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 AHSGP02765 367 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 XRCC1P18887 633 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 HDCP19113 662 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 HOXA11P31270 313 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CHN2P52757 468 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 HECTD2Q5U5R9 776 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GTF3C2Q8WUA4 911 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 RTP4Q96DX8 246 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TBC1D13Q9NVG8 400 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TRPC4Q9UBN4 977 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CDH9Q9ULB4 789 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PCDHB12Q9Y5F1 795 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PTCH2Q9Y6C5 1203 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TLL2Q9Y6L7 1015 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SMIM35A0A1B0GVV1 85 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 FAM149AA5PLN7 773 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SCAMP3O14828 347 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MTSS1O43312 755 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ITGB6P18564 788 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PMLP29590 882 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CPT1AP50416 773 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TAS2R39P59534 338 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 RAB10P61026 200 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MAP2K5Q13163 448 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 INSCQ1MX18 579 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CTC1Q2NKJ3 1217 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MARCH8Q5T0T0 291 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 REP15Q6BDI9 236 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CUZD1Q86UP6 607 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ATP6V0D2Q8N8Y2 350 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 LSM14AQ8ND56 463 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ADAM2Q99965 735 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PAAF1Q9BRP4 392 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GRIP2Q9C0E4 1043 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 MRPL46Q9H2W6 279 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 EML4Q9HC35 981 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 BPIFA1Q9NP55 256 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CASS4Q9NQ75 786 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 LZTS1Q9Y250 596 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ANKRD6Q9Y2G4 727 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TCAF1Q9Y4C2 921 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 COL1A2P08123 1366 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SNX2O60749 519 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SOAT2O75908 522 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ATP5F1P24539 256 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 CD86P42081 329 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TMED1Q13445 227 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 TBCELQ5QJ74 424 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 USP50Q70EL3 339 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 SCAMP5Q8TAC9 235 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 HEXDCQ8WVB3 486 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 PBXIP1Q96AQ6 731 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 ANKRD27Q96NW4 1050 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 UTP6Q9NYH9 597 aaKnown RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 GJD2Q9UKL4 321 aa4.98□□□□□ -1.61
SMAD4-202ENST00000398417 COL22A1Q8NFW1 1626 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-202ENST00000398417 FAM86C2PA6NEL3 165 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms