RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MTG2Q9H4K7 406 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 HEBP1Q9NRV9 189 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 PLA2G4CQ9UP65 541 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 CHMP2BQ9UQN3 213 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 PCDHGC4Q9Y5F7 938 aa21.45■■□□□ 1.02
CPNE1-204ENST00000397443 KIAA1549LQ6ZVL6 1849 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 PSMD3O43242 534 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 PPFIA2O75334 1257 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 SUN1O94901 812 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 NNMTP40261 264 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 MAGEA4P43358 317 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 SLMAPQ14BN4 828 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 PTPRNQ16849 979 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 ALG1LQ6GMV1 187 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 AGGF1Q8N302 714 aaeCLIP21.44■■□□□ 1.02
CPNE1-204ENST00000397443 PHTF2Q8N3S3 785 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 UHMK1Q8TAS1 419 aaKnown RBP21.44■■□□□ 1.02
CPNE1-204ENST00000397443 ERLEC1Q96DZ1 483 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 PPP1R2P1Q96PQ5 205 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 FOXP3Q9BZS1 431 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 TSPYL1Q9H0U9 437 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 XAB2Q9HCS7 855 aaKnown RBP21.44■■□□□ 1.02
CPNE1-204ENST00000397443 MAD1L1Q9Y6D9 718 aa21.44■■□□□ 1.02
CPNE1-204ENST00000397443 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.44■■□□□ 1.02
CPNE1-204ENST00000397443 MGAT1P26572 445 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 KYNUQ16719 465 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 CASC4Q6P4E1 433 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 LRRC8BQ6P9F7 803 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 SRLQ86TD4 932 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 FBXO36Q8NEA4 188 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 IFT43Q96FT9 208 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 WDR83Q9BRX9 315 aaKnown RBP21.43■■□□□ 1.02
CPNE1-204ENST00000397443 TXLNGYQ9BZA5 131 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 VPS45Q9NRW7 570 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 ZNF446Q9NWS9 450 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 ATG2BQ96BY7 2078 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-204ENST00000397443 ACSL3O95573 720 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 IGSF6O95976 241 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 ADRA1AP35348 466 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 ELK3P41970 407 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 GALK1P51570 392 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 ST8SIA6P61647 398 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 NSUN2Q08J23 767 aaKnown RBP eCLIP21.43■■□□□ 1.02
CPNE1-204ENST00000397443 FNDC3BQ53EP0 1204 aaKnown RBP21.43■■□□□ 1.02
CPNE1-204ENST00000397443 IER5LQ5T953 404 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 TXNDC11Q6PKC3 985 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 METTL3Q86U44 580 aaKnown RBP21.43■■□□□ 1.02
CPNE1-204ENST00000397443 IGDCC3Q8IVU1 814 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 FAM50BQ9Y247 325 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 CHKBQ9Y259 395 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 ANKRD36A6QL64 1941 aa21.43■■□□□ 1.02
CPNE1-204ENST00000397443 PIGNO95427 931 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 ASLP04424 464 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 APODP05090 189 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 HSD17B3P37058 310 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 GALNT3Q14435 633 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 CASP8Q14790 479 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 CERCAMQ5T4B2 595 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 NCEH1Q6PIU2 408 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 LINC00523Q86TU6 105 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 KLHDC8BQ8IXV7 354 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 PAF1Q8N7H5 531 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 OR2AP1Q8NGE2 309 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 PYROXD1Q8WU10 500 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 MYO19Q96H55 970 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 P2RY13Q9BPV8 354 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 TRIM56Q9BRZ2 755 aaKnown RBP21.42■■□□□ 1.02
CPNE1-204ENST00000397443 FRMD8Q9BZ67 464 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-204ENST00000397443 CASS4Q9NQ75 786 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 HECAQ9UBI9 543 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-204ENST00000397443 PIAS3Q9Y6X2 628 aa21.42■■□□□ 1.02
CPNE1-204ENST00000397443 SPECC1L-ADORA2AF8WAN1 911 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 ATP9BO43861 1147 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 BMP1P13497 986 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 HLA-EP13747 358 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 CTHP32929 405 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 GRIA2P42262 883 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 MAGEA3P43357 314 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 SNRPD1P62314 119 aaKnown RBP21.41■■□□□ 1.02
CPNE1-204ENST00000397443 CDK18Q07002 472 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 CDH17Q12864 832 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 UAP1Q16222 522 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-204ENST00000397443 DNAJC21Q5F1R6 531 aaKnown RBP21.41■■□□□ 1.02
CPNE1-204ENST00000397443 EMC10Q5UCC4 262 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 CAMK1DQ8IU85 385 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 TADA1Q96BN2 335 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 CFAP36Q96G28 342 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 ZDHHC6Q9H6R6 413 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 SYBUQ9NX95 663 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 NINJ2Q9NZG7 142 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 RAI2Q9Y5P3 530 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 E7ESA3 106 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 CPP00450 1065 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 EIF2DP41214 584 aaKnown RBP21.41■■□□□ 1.02
CPNE1-204ENST00000397443 SEC13P55735 322 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 TRAF2Q12933 501 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 DPY19L3Q6ZPD9 716 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 CHST14Q8NCH0 376 aa21.41■■□□□ 1.02
CPNE1-204ENST00000397443 SLC8A2Q9UPR5 921 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms