RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 NFS1Q9Y697 457 aa27.84■■■□□ 2.05
CPNE1-203ENST00000397442 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.84■■■□□ 2.05
CPNE1-203ENST00000397442 SERPINF2P08697 491 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 POLR2EP19388 210 aaKnown RBP27.83■■■□□ 2.05
CPNE1-203ENST00000397442 MGAT1P26572 445 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 GPX6P59796 221 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 ATXN7L2Q5T6C5 722 aaPredicted RBP27.83■■■□□ 2.05
CPNE1-203ENST00000397442 KDELC2Q7Z4H8 507 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 SORCS1Q8WY21 1168 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 HLA-CQ95604 372 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 MRGPRX3Q96LB0 322 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 TTC25Q96NG3 672 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 ZIM3Q96PE6 472 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 SCUBE2Q9NQ36 999 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 SLCO3A1Q9UIG8 710 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 SLC25A13Q9UJS0 675 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 ERVW-1Q9UQF0 538 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 PLAAQ9Y263 795 aa27.83■■■□□ 2.05
CPNE1-203ENST00000397442 LOC285095A0A1B0GVY8 99 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 SDR42E2A6NKP2 422 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 NUDT17P0C025 328 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 CRADDP78560 199 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 CDH17Q12864 832 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 ITPRIPL2Q3MIP1 535 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 ALS2CLQ60I27 953 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 GRAMD4Q6IC98 578 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 DNAAF3Q8N9W5 541 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 TM6SF2Q9BZW4 377 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 PLAC1Q9HBJ0 212 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 ARNT2Q9HBZ2 717 aa27.82■■■□□ 2.04
CPNE1-203ENST00000397442 PRRT4C9JH25 899 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 CHRNA4P43681 627 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 AAK1Q2M2I8 961 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 DENND2CQ68D51 928 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 NCEH1Q6PIU2 408 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 NXPE3Q969Y0 559 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 ISG20Q96AZ6 181 aaKnown RBP27.81■■■□□ 2.04
CPNE1-203ENST00000397442 ZBTB9Q96C00 473 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 EBNA1BP2Q99848 306 aaKnown RBP27.81■■■□□ 2.04
CPNE1-203ENST00000397442 SYBUQ9NX95 663 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 ANKRD36A6QL64 1941 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 SHBGP04278 402 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 PTPRNQ16849 979 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 HABP4Q5JVS0 413 aaKnown RBP27.81■■■□□ 2.04
CPNE1-203ENST00000397442 CERCAMQ5T4B2 595 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 C22orf39Q6P5X5 142 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 OR2W6PQ8NHA6 318 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 UHMK1Q8TAS1 419 aaKnown RBP27.81■■■□□ 2.04
CPNE1-203ENST00000397442 CYB5D2Q8WUJ1 264 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 MYO19Q96H55 970 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 FEM1CQ96JP0 617 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 TRIB3Q96RU7 358 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 TRIM56Q9BRZ2 755 aaKnown RBP27.81■■■□□ 2.04
CPNE1-203ENST00000397442 TNKS2Q9H2K2 1166 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 BRD9Q9H8M2 597 aa27.81■■■□□ 2.04
CPNE1-203ENST00000397442 TICRRQ7Z2Z1 1910 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 AGPSO00116 658 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 ATXN1LP0C7T5 689 aaKnown RBP27.8■■■□□ 2.04
CPNE1-203ENST00000397442 TPH1P17752 444 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 SSTR1P30872 391 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 CSNK1DP48730 415 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 KDSRQ06136 332 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 SLC1A5Q15758 541 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 RALGPS1Q5JS13 557 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 SRLQ86TD4 932 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 VOPP1Q96AW1 172 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 PHF7Q9BWX1 381 aaPredicted RBP27.8■■■□□ 2.04
CPNE1-203ENST00000397442 CIPCQ9C0C6 399 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 CEP44Q9C0F1 390 aa27.8■■■□□ 2.04
CPNE1-203ENST00000397442 AP3B1O00203 1094 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 CPP00450 1065 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 EPOP01588 193 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 ABHD2P08910 425 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 EIF2DP41214 584 aaKnown RBP27.79■■■□□ 2.04
CPNE1-203ENST00000397442 NPY2RP49146 381 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 VASPP50552 380 aaPredicted RBP27.79■■■□□ 2.04
CPNE1-203ENST00000397442 CDK18Q07002 472 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 DLG2Q15700 870 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 SMAD2Q15796 467 aaKnown RBP27.79■■■□□ 2.04
CPNE1-203ENST00000397442 SFTPA1Q8IWL2 248 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 ELOVL2Q9NXB9 296 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 BFARQ9NZS9 450 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 ZC3H7BQ9UGR2 993 aaKnown RBP27.79■■■□□ 2.04
CPNE1-203ENST00000397442 MAD1L1Q9Y6D9 718 aa27.79■■■□□ 2.04
CPNE1-203ENST00000397442 MYLKQ15746 1914 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 ATP9BO43861 1147 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 ASLP04424 464 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 DLDP09622 509 aaKnown RBP27.78■■■□□ 2.04
CPNE1-203ENST00000397442 AP1S1P61966 158 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 MSLNQ13421 630 aaPredicted RBP27.78■■■□□ 2.04
CPNE1-203ENST00000397442 CAPN12Q6ZSI9 719 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 PALM2Q8IXS6 379 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 TERB1Q8NA31 727 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 OR2AP1Q8NGE2 309 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 STAMBPL1Q96FJ0 436 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 TDRD1Q9BXT4 1180 aaKnown RBP27.78■■■□□ 2.04
CPNE1-203ENST00000397442 PCDHGC4Q9Y5F7 938 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 COL4A2P08572 1712 aa27.78■■■□□ 2.04
CPNE1-203ENST00000397442 MUC22E2RYF6 1773 aaPredicted RBP27.78■■■□□ 2.04
CPNE1-203ENST00000397442 PRLP01236 227 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms