RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ZCCHC9Q8N567 271 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 PDCD7Q8N8D1 485 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 HNRNPLLQ8WVV9 542 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 ANKRD7Q92527 254 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 TADA1Q96BN2 335 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 PWWP2AQ96N64 755 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 POLR1EQ9GZS1 481 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 MTRF1LQ9UGC7 380 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 FCF1Q9Y324 198 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 MYLKQ15746 1914 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 ERI2A8K979 691 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 E7EVH7 732 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 SMAD6O43541 496 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 ERLIN1O75477 346 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 GJB3O75712 270 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 AP2A1O95782 977 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 MT-CYBP00156 380 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 SRCP12931 536 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 POLR2EP19388 210 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 HSPA9P38646 679 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 SOX9P48436 509 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 CDK16Q00536 496 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 ITKQ08881 620 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 PRPSAP1Q14558 356 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 ZNF534Q76KX8 674 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 METTL3Q86U44 580 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 SH2D3CQ8N5H7 860 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 TERB1Q8NA31 727 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 MCUQ8NE86 351 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 CSGALNACT1Q8TDX6 532 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 RPL10LQ96L21 214 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 MRGPRX3Q96LB0 322 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 PPP1R2P1Q96PQ5 205 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 RBM15Q96T37 977 aaKnown RBP eCLIP17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 HAUS2Q9NVX0 235 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 SLC25A13Q9UJS0 675 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 ERVW-1Q9UQF0 538 aa17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 AAR2Q9Y312 384 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-205ENST00000397406 TTC24A2A3L6 582 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 PRRT4C9JH25 899 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 GOLGA8MH3BSY2 632 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 ZNF821O75541 412 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 ANXA9O76027 345 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 SUN1O94901 812 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 VASPP50552 380 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 GEMP55040 296 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 SKOR1P84550 965 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 NSUN2Q08J23 767 aaKnown RBP eCLIP17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 GAS6Q14393 721 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 MAP9Q49MG5 647 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 EMBQ6PCB8 327 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 TXNDC11Q6PKC3 985 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 KDELC1Q6UW63 502 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 ZNF852Q6ZMS4 543 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 ATP11CQ8NB49 1132 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 CAVIN3Q969G5 261 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 MYO19Q96H55 970 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 EXOC2Q96KP1 924 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 NSMCE3Q96MG7 304 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 SEMA3CQ99985 751 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 FOXP3Q9BZS1 431 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 ARGLU1Q9NWB6 273 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 UBP1Q9NZI7 540 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 PIAS3Q9Y6X2 628 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 CACNA1IQ9P0X4 2223 aa17.15■□□□□ 0.34
TSPAN4-205ENST00000397406 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 PSMD3O43242 534 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 ASLP04424 464 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 CD86P42081 329 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 GRIA1P42261 906 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 LMAN1P49257 510 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 RHOAP61586 193 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 CBLBQ13191 982 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 EIF4HQ15056 248 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 DGKKQ5KSL6 1271 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 BEND6Q5SZJ8 279 aaPredicted RBP17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 CAND1Q86VP6 1230 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 SORCS1Q8WY21 1168 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 ISG20Q96AZ6 181 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 SERPINB12Q96P63 405 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 NUDCD1Q96RS6 583 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 TXLNGYQ9BZA5 131 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 ELOVL2Q9NXB9 296 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 SLCO3A1Q9UIG8 710 aa17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 NDRG2Q9UN36 371 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-205ENST00000397406 GOLGA6CA6NDK9 693 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 GOLGA6BA6NDN3 693 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 ATP9BO43861 1147 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 PPFIA2O75334 1257 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 ATP5BP06576 529 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 SRPRAP08240 638 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 DLDP09622 509 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 GOLGA6DP0CG33 693 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 TDGF1P13385 188 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 CES1P23141 567 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 ADRA1AP35348 466 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 RPS9P46781 194 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 MTAPQ13126 283 aa17.13■□□□□ 0.33
TSPAN4-205ENST00000397406 MPP3Q13368 585 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms