RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 PRRT3Q5FWE3 981 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 TMPRSS9Q7Z410 1059 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 TMEM110Q86TL2 294 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 RBFAQ8N0V3 343 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 PPM1KQ8N3J5 372 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 BTN2A2Q8WVV5 523 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 APOBEC4Q8WW27 367 aaKnown RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 NKD1Q969G9 470 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 TMEM159Q96B96 161 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 PPP1R16AQ96I34 528 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 FEM1CQ96JP0 617 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 TBATAQ96M53 351 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 RPRD1AQ96P16 312 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 LENG8Q96PV6 779 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 MED15Q96RN5 788 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 SLC17A9Q9BYT1 436 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 METTL14Q9HCE5 456 aaKnown RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 PRDM8Q9NQV8 689 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 DONSONQ9NYP3 566 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 SIRPGQ9P1W8 387 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 SPASTQ9UBP0 616 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 APOBEC3BQ9UH17 382 aaKnown RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 ARMCX3Q9UH62 379 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-203ENST00000397378 GGT7Q9UJ14 662 aa9.6□□□□□ -0.87
NEDD9-203ENST00000397378 A0A1W2PQM1 296 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 LMO7DNF2Z398 122 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 RNF103O00237 685 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 RAD51BO15315 384 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 AP1G1O43747 822 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 PAK4O96013 591 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-203ENST00000397378 CALCAP01258 141 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 FMO5P49326 533 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 IRAK1P51617 712 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 NEK3P51956 506 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 CDH4P55283 916 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 CDK17Q00537 523 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 PDE1CQ14123 709 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-203ENST00000397378 COBLL1Q53SF7 1204 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 ATP11CQ8NB49 1132 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 CHST14Q8NCH0 376 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 DENND6BQ8NEG7 585 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 CPT1CQ8TCG5 803 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 GPBAR1Q8TDU6 330 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 ASB12Q8WXK4 309 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 KAT5Q92993 513 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 PSMB7Q99436 277 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 KLF6Q99612 283 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-203ENST00000397378 C2orf49Q9BVC5 232 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-203ENST00000397378 LRRN3Q9H3W5 708 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 DDIT4Q9NX09 232 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 IL36AQ9UHA7 158 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 VPS51Q9UID3 782 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 VANGL2Q9ULK5 521 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 DOLKQ9UPQ8 538 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 CNTN6Q9UQ52 1028 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 ADGRG4Q8IZF6 3080 aa9.59□□□□□ -0.87
NEDD9-203ENST00000397378 SETD2Q9BYW2 2564 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-203ENST00000397378 E5RJQ4 531 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 K7ERQ8 282 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 FPGTO14772 594 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 NKX2-8O15522 239 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 SPINT1O43278 529 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 SMAD6O43541 496 aaKnown RBP9.58□□□□□ -0.88
NEDD9-203ENST00000397378 SNAP91O60641 907 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 GCATO75600 419 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 LEFTY1O75610 366 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 GLI1P08151 1106 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 ADRB3P13945 408 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 RRM1P23921 792 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 ITGB7P26010 798 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 PRCPP42785 496 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 NDUFA8P51970 172 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 PFN3P60673 137 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 GCNT1Q02742 428 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 C1QBPQ07021 282 aaKnown RBP9.58□□□□□ -0.88
NEDD9-203ENST00000397378 CDC20Q12834 499 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 EIF2B5Q13144 721 aaKnown RBP9.58□□□□□ -0.88
NEDD9-203ENST00000397378 DEFB109BQ30KR1 87 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 ARSIQ5FYB1 569 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 PHF19Q5T6S3 580 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 KRBA2Q6ZNG9 492 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 SMYD4Q8IYR2 804 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-203ENST00000397378 ARL10Q8N8L6 244 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 DCAF4L2Q8NA75 395 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 KYQ8NBH2 561 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 LMO3Q8TAP4 145 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 PDCD6IPQ8WUM4 868 aaKnown RBP9.58□□□□□ -0.88
NEDD9-203ENST00000397378 SLC2A13Q96QE2 648 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 TSG101Q99816 390 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 C1QTNF2Q9BXJ5 285 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 MUC3BQ9H195 1237 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 TCEAL2Q9H3H9 227 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-203ENST00000397378 FAM204AQ9H8W3 233 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 ASNSD1Q9NWL6 643 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 AKAP7Q9P0M2 348 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-203ENST00000397378 DAAM1Q9Y4D1 1078 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 FADS3Q9Y5Q0 445 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 HS3ST4Q9Y661 456 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 WASF2Q9Y6W5 498 aa9.58□□□□□ -0.88
NEDD9-203ENST00000397378 ESPL1Q14674 2120 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms