RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 TRAV19A0A0A6YYK7 116 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 CRTAMO95727 393 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 GLDCP23378 1020 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 CCNCP24863 283 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 PBLDP30039 288 aaPredicted RBP15.37■□□□□ 0.05
MCF2L-205ENST00000397017 CDH13P55290 713 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 FSTL4Q6MZW2 842 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 FAM171BQ6P995 826 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 ZNF598Q86UK7 904 aaKnown RBP15.37■□□□□ 0.05
MCF2L-205ENST00000397017 RFWD2Q8NHY2 731 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 PBXIP1Q96AQ6 731 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 ULK4Q96C45 1275 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 HAPLN3Q96S86 360 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 CDK5RAP1Q96SZ6 601 aaKnown RBP15.37■□□□□ 0.05
MCF2L-205ENST00000397017 ADGRE3Q9BY15 652 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 MYLK2Q9H1R3 596 aa15.37■□□□□ 0.05
MCF2L-205ENST00000397017 ZMPSTE24O75844 475 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 HNRNPLP14866 589 aaKnown RBP eCLIP15.36■□□□□ 0.05
MCF2L-205ENST00000397017 CST5P28325 142 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-205ENST00000397017 HADHAP40939 763 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 BADQ92934 168 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 DNAJC1Q96KC8 554 aaKnown RBP15.36■□□□□ 0.05
MCF2L-205ENST00000397017 SLC40A1Q9NP59 571 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 PAPPA2Q9BXP8 1791 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 COCHO43405 550 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 PPM1AP35813 382 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 BCL2L1Q07817 233 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 PDK4Q16654 411 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 LRRC36Q1X8D7 754 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 DCBLD1Q8N8Z6 715 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 KLHL23Q8NBE8 558 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 OR13C4Q8NGS5 318 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 ARNTL2Q8WYA1 636 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 LMCD1Q9NZU5 365 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 TMEM216Q9P0N5 145 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 ARL5AQ9Y689 179 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 MEI4A8MW99 385 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 TK2O00142 265 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 DCLK1O15075 740 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 OAZ2O95190 189 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 PGM1P36871 562 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 RASA2Q15283 850 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 AGAP9Q5VTM2 703 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 C1orf146Q5VVC0 180 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 PKN3Q6P5Z2 889 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 NAPRTQ6XQN6 538 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 DET1Q7L5Y6 550 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 TSPAN17Q96FV3 270 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 C8orf48Q96LL4 319 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 CASD1Q96PB1 797 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 C2orf49Q9BVC5 232 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-205ENST00000397017 ILKAPQ9H0C8 392 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-205ENST00000397017 KLC4Q9NSK0 619 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 XPR1Q9UBH6 696 aa15.36■□□□□ 0.05
MCF2L-205ENST00000397017 TRMT6Q9UJA5 497 aaKnown RBP15.36■□□□□ 0.05
MCF2L-205ENST00000397017 ATP6AP2A0A1C7CYW4 349 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 INPPL1O15357 1258 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 TEX28O15482 410 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 SH3BP5O60239 455 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 ATP6AP2O75787 350 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 PPARGP37231 505 aaPredicted RBP15.35■□□□□ 0.05
MCF2L-205ENST00000397017 ZNF135P52742 658 aaPredicted RBP15.35■□□□□ 0.05
MCF2L-205ENST00000397017 NAA25Q14CX7 972 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 RSPO2Q6UXX9 243 aaPredicted RBP15.35■□□□□ 0.05
MCF2L-205ENST00000397017 RNF148Q8N7C7 305 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 DCAKDQ8WVC6 231 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 CRISPLD1Q9H336 500 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 ADA2Q9NZK5 511 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 C1orf232A0A0U1RR37 186 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 IRF9Q00978 393 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 PAFAH1B3Q15102 231 aaKnown RBP15.35■□□□□ 0.05
MCF2L-205ENST00000397017 PTPRNQ16849 979 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 XKR4Q5GH76 650 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 ELMSAN1Q6PJG2 1045 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 CMTM8Q8IZV2 173 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 ZSCAN18Q8TBC5 510 aaPredicted RBP15.35■□□□□ 0.05
MCF2L-205ENST00000397017 ATXN2LQ8WWM7 1075 aaKnown RBP15.35■□□□□ 0.05
MCF2L-205ENST00000397017 DCUN1D1Q96GG9 259 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 FAM167BQ9BTA0 163 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 DYRK4Q9NR20 520 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 PHF24Q9UPV7 400 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 URB1O60287 2271 aaKnown RBP15.35■□□□□ 0.05
MCF2L-205ENST00000397017 PIGNO95427 931 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 ARMC12Q5T9G4 340 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 VWA5B1Q5TIE3 1220 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 FAM151BQ6UXP7 276 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 C12orf76Q8N812 135 aaPredicted RBP15.35■□□□□ 0.05
MCF2L-205ENST00000397017 PNPOQ9NVS9 261 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 RNF112Q9ULX5 631 aa15.35■□□□□ 0.05
MCF2L-205ENST00000397017 NEMP2A6NFY4 417 aa15.34■□□□□ 0.05
MCF2L-205ENST00000397017 FCHO1O14526 889 aa15.34■□□□□ 0.05
MCF2L-205ENST00000397017 TRIM13O60858 407 aa15.34■□□□□ 0.05
MCF2L-205ENST00000397017 MUM1Q2TAK8 710 aa15.34■□□□□ 0.05
MCF2L-205ENST00000397017 ALYREFQ86V81 257 aaKnown RBP15.34■□□□□ 0.05
MCF2L-205ENST00000397017 IFNEQ86WN2 208 aa15.34■□□□□ 0.05
MCF2L-205ENST00000397017 SPNS2Q8IVW8 549 aa15.34■□□□□ 0.05
MCF2L-205ENST00000397017 EFCAB3Q8N7B9 438 aa15.34■□□□□ 0.05
MCF2L-205ENST00000397017 CNTD1Q8N815 330 aa15.34■□□□□ 0.05
MCF2L-205ENST00000397017 CENPIQ92674 756 aaPredicted RBP15.34■□□□□ 0.05
MCF2L-205ENST00000397017 ACE2Q9BYF1 805 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms