RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CDH16O75309 829 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 CHRNA4P43681 627 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 SERPINH1P50454 418 aaKnown RBP12.87□□□□□ -0.35
TRIM39-204ENST00000396548 DHCR24Q15392 516 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 KLHL38Q2WGJ6 581 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 NCEH1Q6PIU2 408 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 ADIPOR2Q86V24 386 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 SLC44A1Q8WWI5 657 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 TTC17Q96AE7 1141 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 CYTH2Q99418 400 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 FAM83CQ9BQN1 747 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 CCDC77Q9BR77 488 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 C2orf49Q9BVC5 232 aaPredicted RBP12.87□□□□□ -0.35
TRIM39-204ENST00000396548 CDH7Q9ULB5 785 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 MAD1L1Q9Y6D9 718 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 FAM169AQ9Y6X4 670 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 K7ERQ8 282 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 SMAD6O43541 496 aaKnown RBP12.87□□□□□ -0.35
TRIM39-204ENST00000396548 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
TRIM39-204ENST00000396548 PIAS1O75925 651 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 PRLP01236 227 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 CTSOP43234 321 aaPredicted RBP12.87□□□□□ -0.35
TRIM39-204ENST00000396548 ADGRE1Q14246 886 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 SIRPB2Q5JXA9 342 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 SPANXN3Q5MJ09 141 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 TMEM215Q68D42 235 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 UNC5BQ8IZJ1 945 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 BBS2Q9BXC9 721 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 SLC2A11Q9BYW1 496 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 CHRAC1Q9NRG0 131 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 DUS2Q9NX74 493 aaKnown RBP12.87□□□□□ -0.35
TRIM39-204ENST00000396548 BFARQ9NZS9 450 aa12.87□□□□□ -0.35
TRIM39-204ENST00000396548 NOVA2Q9UNW9 492 aaKnown RBP12.87□□□□□ -0.35
TRIM39-204ENST00000396548 TMEM265A0A087WTH1 108 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 A0A1W2PPC1 479 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 GOLGA6L10A6NI86 522 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 IVLP07476 585 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 CSNK1DP48730 415 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 GYS2P54840 703 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 ITKQ08881 620 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 FCHO2Q0JRZ9 810 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 GET4Q7L5D6 327 aaPredicted RBP12.86□□□□□ -0.35
TRIM39-204ENST00000396548 EXOC3L1Q86VI1 746 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 GOLGA6L1Q8N7Z2 621 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 DNAAF3Q8N9W5 541 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 BPIFB1Q8TDL5 484 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 MYADMQ96S97 322 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 PAFAH2Q99487 392 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 MCMBPQ9BTE3 642 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 GGA2Q9UJY4 613 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 HS3ST2Q9Y278 367 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 COL4A2P08572 1712 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 TLDC2A0PJX2 215 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 OTOL1A6NHN0 477 aaPredicted RBP12.86□□□□□ -0.35
TRIM39-204ENST00000396548 FOXO6A8MYZ6 492 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 GRIN2CQ14957 1233 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 ANKRD20A4Q4UJ75 823 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 RALGPS1Q5JS13 557 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 PCID2Q5JVF3 399 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 TRIM68Q6AZZ1 485 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 TANGO2Q6ICL3 276 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 VITQ6UXI7 678 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 PTCD2Q8WV60 388 aaKnown RBP12.86□□□□□ -0.35
TRIM39-204ENST00000396548 ZNF778Q96MU6 729 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 TREX1Q9NSU2 369 aa12.86□□□□□ -0.35
TRIM39-204ENST00000396548 FCF1Q9Y324 198 aaKnown RBP12.86□□□□□ -0.35
TRIM39-204ENST00000396548 MROH6A6NGR9 719 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 SMIM23A6NLE4 172 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 HEPACAM2A8MVW5 462 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 RGS16O15492 202 aaPredicted RBP12.85□□□□□ -0.35
TRIM39-204ENST00000396548 NEBLO76041 1014 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 POLBP06746 335 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 MAGOHP61326 146 aaKnown RBP12.85□□□□□ -0.35
TRIM39-204ENST00000396548 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 PCSK7Q16549 785 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 PKN3Q6P5Z2 889 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 C12orf40Q86WS4 652 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 BBS5Q8N3I7 341 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 ATP2A3Q93084 1043 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 FSD1LQ9BXM9 530 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 TDRD1Q9BXT4 1180 aaKnown RBP12.85□□□□□ -0.35
TRIM39-204ENST00000396548 PLA2G2FQ9BZM2 168 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 FZD6O60353 706 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 FAM155BO75949 473 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 NMBRP28336 390 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
TRIM39-204ENST00000396548 CDK18Q07002 472 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 DMC1Q14565 340 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 DGKKQ5KSL6 1271 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 KDM7AQ6ZMT4 941 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 ZNF557Q8N988 423 aaPredicted RBP12.85□□□□□ -0.35
TRIM39-204ENST00000396548 HPS4Q9NQG7 708 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 PSMC3IPQ9P2W1 217 aaPredicted RBP12.85□□□□□ -0.35
TRIM39-204ENST00000396548 ZNF180Q9UJW8 692 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 TCAF1Q9Y4C2 921 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 TRIM24O15164 1050 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 POLR3GO15318 223 aaPredicted RBP12.85□□□□□ -0.35
TRIM39-204ENST00000396548 SERPINF2P08697 491 aa12.85□□□□□ -0.35
TRIM39-204ENST00000396548 PABPC1P11940 636 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms