RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 VNN2O95498 520 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 FGF1P05230 155 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 POU4F1Q01851 419 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 BTG3Q14201 252 aaPredicted RBP16.31■□□□□ 0.2
SNX6-202ENST00000396526 SUGP1Q8IWZ8 645 aaKnown RBP16.31■□□□□ 0.2
SNX6-202ENST00000396526 MCUR1Q96AQ8 359 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 NUDCD1Q96RS6 583 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 TREX1Q9NSU2 369 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 TMEM114B3SHH9 223 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 ADAM12O43184 909 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 CIR1Q86X95 450 aaPredicted RBP16.31■□□□□ 0.2
SNX6-202ENST00000396526 DENND1CQ8IV53 801 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 HERC6Q8IVU3 1022 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 ANKLE1Q8NAG6 615 aa16.31■□□□□ 0.2
SNX6-202ENST00000396526 BCL7CQ8WUZ0 217 aaPredicted RBP16.31■□□□□ 0.2
SNX6-202ENST00000396526 CINPQ9BW66 212 aaPredicted RBP16.31■□□□□ 0.2
SNX6-202ENST00000396526 UBA2Q9UBT2 640 aaPredicted RBP16.31■□□□□ 0.2
SNX6-202ENST00000396526 A0A087X1B8 175 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 TRAFD1O14545 582 aaPredicted RBP16.3■□□□□ 0.2
SNX6-202ENST00000396526 GYG2O15488 501 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 SLC7A4O43246 635 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 EFCAB14O75071 495 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 ATP6V1G2O95670 118 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 RHOCP08134 193 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 KRT16P08779 473 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 MYL4P12829 197 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 LAG3P18627 525 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 CES1P23141 567 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 EPHB3P54753 998 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 KLC3Q6P597 504 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 CFAP52Q8N1V2 620 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 C2CD4AQ8NCU7 369 aaPredicted RBP16.3■□□□□ 0.2
SNX6-202ENST00000396526 FEM1CQ96JP0 617 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 ACE2Q9BYF1 805 aaPredicted RBP16.3■□□□□ 0.2
SNX6-202ENST00000396526 TRIM33Q9UPN9 1127 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 TET1Q8NFU7 2136 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 SIN3BO75182 1162 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 EZRP15311 586 aaKnown RBP16.3■□□□□ 0.2
SNX6-202ENST00000396526 ARCN1P48444 511 aaKnown RBP16.3■□□□□ 0.2
SNX6-202ENST00000396526 DLG2Q15700 870 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 TCTN1Q2MV58 587 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 NOD2Q9HC29 1040 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 FBXO6Q9NRD1 293 aaPredicted RBP16.3■□□□□ 0.2
SNX6-202ENST00000396526 SPG21Q9NZD8 308 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 KLHL2O95198 593 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 ACVRL1P37023 503 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 CLCN5P51795 746 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 RFTN1Q14699 578 aaPredicted RBP16.3■□□□□ 0.2
SNX6-202ENST00000396526 C5orf22Q49AR2 442 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 FAM91A1Q658Y4 838 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 NADSYN1Q6IA69 706 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 RFWD3Q6PCD5 774 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 CLEC14AQ86T13 490 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 DENND6AQ8IWF6 608 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 PLD6Q8N2A8 252 aaKnown RBP16.3■□□□□ 0.2
SNX6-202ENST00000396526 PEX13Q92968 403 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 CLSTN3Q9BQT9 956 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 CWH43Q9H720 699 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 ZNF358Q9NW07 568 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 ZFP37Q9Y6Q3 630 aaPredicted RBP16.3■□□□□ 0.2
SNX6-202ENST00000396526 PCNTO95613 3336 aa16.3■□□□□ 0.2
SNX6-202ENST00000396526 PHGDHO43175 533 aaKnown RBP16.29■□□□□ 0.2
SNX6-202ENST00000396526 DSG1Q02413 1049 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 PABPC1LQ4VXU2 614 aaKnown RBP16.29■□□□□ 0.2
SNX6-202ENST00000396526 ARTNQ5T4W7 220 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 ITIH5Q86UX2 942 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 SLC41A1Q8IVJ1 513 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 MAGEC3Q8TD91 643 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 ZNF419Q96HQ0 510 aaPredicted RBP16.29■□□□□ 0.2
SNX6-202ENST00000396526 MYRFLQ96LU7 910 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 TBC1D10AQ9BXI6 508 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 ILKAPQ9H0C8 392 aaPredicted RBP16.29■□□□□ 0.2
SNX6-202ENST00000396526 CPSF2Q9P2I0 782 aaKnown RBP16.29■□□□□ 0.2
SNX6-202ENST00000396526 SLC2A6Q9UGQ3 507 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 RPL26L1Q9UNX3 145 aaKnown RBP16.29■□□□□ 0.2
SNX6-202ENST00000396526 YIPF1Q9Y548 306 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 VWA8A3KMH1 1905 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 A0A1B0GVM2 712 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 TCAF2A6NFQ2 919 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 COCHO43405 550 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 SERPINA6P08185 405 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 HOXB8P17481 243 aaPredicted RBP16.29■□□□□ 0.2
SNX6-202ENST00000396526 CORO1AP31146 461 aaKnown RBP16.29■□□□□ 0.2
SNX6-202ENST00000396526 ZRSR2Q15696 482 aaKnown RBP16.29■□□□□ 0.2
SNX6-202ENST00000396526 FAM83EQ2M2I3 478 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 ADGRF1Q5T601 910 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 LONP2Q86WA8 852 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 BTBD10Q9BSF8 475 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 ATP13A1Q9HD20 1204 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 PCDHB12Q9Y5F1 795 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 PLXNA3P51805 1871 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 ILVBLA1L0T0 632 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 ABLIM3O94929 683 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 SLC1A2P43004 574 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 MPP1Q00013 466 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 PLD1Q13393 1074 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 MRNIPQ6NTE8 343 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 CHST9Q7L1S5 443 aa16.29■□□□□ 0.2
SNX6-202ENST00000396526 SETD3Q86TU7 594 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms