RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 QKIQ96PU8 341 aaKnown RBP eCLIP19.44■□□□□ 0.7
HOXA9-202ENST00000396345 NUDCD1Q96RS6 583 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 TUBGCP5Q96RT8 1024 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 IL12RB2Q99665 862 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 BTBD1Q9H0C5 482 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 EPC1Q9H2F5 836 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 SEMA4AQ9H3S1 761 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 SGK2Q9HBY8 427 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 SCUBE2Q9NQ36 999 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 KCND1Q9NSA2 647 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 ABCA7Q8IZY2 2146 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 TCRBV7S2A1N4TA0A589 114 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 TTC24A2A3L6 582 aaPredicted RBP19.43■□□□□ 0.7
HOXA9-202ENST00000396345 GJB3O75712 270 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 RHOBTB1O94844 696 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 HLA-DQB2P05538 268 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 CR2P20023 1033 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 ITGB7P26010 798 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 CXCR5P32302 372 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 ACSL1P33121 698 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 EIF3EP60228 445 aaKnown RBP19.43■□□□□ 0.7
HOXA9-202ENST00000396345 AP1S1P61966 158 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 ZBTB17Q13105 803 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 PLK5Q496M5 336 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 SLC45A4Q5BKX6 768 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 ZNF805Q5CZA5 627 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 RALGPS1Q5JS13 557 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 LPCAT2Q7L5N7 544 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 SLC13A5Q86YT5 568 aaPredicted RBP19.43■□□□□ 0.7
HOXA9-202ENST00000396345 ZC3H10Q96K80 434 aaKnown RBP19.43■□□□□ 0.7
HOXA9-202ENST00000396345 FAM118BQ9BPY3 351 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 GPR174Q9BXC1 333 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 HDAC8Q9BY41 377 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 POLR1EQ9GZS1 481 aaKnown RBP19.43■□□□□ 0.7
HOXA9-202ENST00000396345 DUSP15Q9H1R2 295 aaPredicted RBP19.43■□□□□ 0.7
HOXA9-202ENST00000396345 ATP13A3Q9H7F0 1226 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 RAB23Q9ULC3 237 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 TTLL3Q9Y4R7 772 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 SPAG17Q6Q759 2223 aa19.43■□□□□ 0.7
HOXA9-202ENST00000396345 NUMA1Q14980 2115 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.42■□□□□ 0.7
HOXA9-202ENST00000396345 C16orf96A6NNT2 1141 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 MTSS1O43312 755 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 CEP104O60308 925 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 PIGNO95427 931 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 ATP1A1P05023 1023 aaKnown RBP19.42■□□□□ 0.7
HOXA9-202ENST00000396345 SERPINA4P29622 427 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 GNG11P61952 73 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 BCL2L1Q07817 233 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 ELF2Q15723 593 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 LPAL2Q16609 132 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 NCEH1Q6PIU2 408 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 ERN2Q76MJ5 926 aaKnown RBP19.42■□□□□ 0.7
HOXA9-202ENST00000396345 CAMK1DQ8IU85 385 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 CDKL3Q8IVW4 592 aaPredicted RBP19.42■□□□□ 0.7
HOXA9-202ENST00000396345 C17orf53Q8N3J3 647 aaPredicted RBP19.42■□□□□ 0.7
HOXA9-202ENST00000396345 OR14C36Q8NHC7 312 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 ZNF641Q96N77 438 aaPredicted RBP19.42■□□□□ 0.7
HOXA9-202ENST00000396345 SEMA3CQ99985 751 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 CEP41Q9BYV8 373 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 SUV39H2Q9H5I1 410 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 NOD2Q9HC29 1040 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 ATP8A1Q9Y2Q0 1164 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 THADAQ6YHU6 1953 aa19.42■□□□□ 0.7
HOXA9-202ENST00000396345 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 SLC7A4O43246 635 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 SEMA4FO95754 770 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 RBP3P10745 1247 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 CES1P23141 567 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 PTPN3P26045 913 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 NEK3P51956 506 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 TEX44Q53QW1 395 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 PIP5KL1Q5T9C9 394 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 AGBL4Q5VU57 503 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 PMS2CLQ68D20 193 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 ALG1LQ6GMV1 187 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 FBXL19Q6PCT2 694 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 DARS2Q6PI48 645 aaKnown RBP19.41■□□□□ 0.7
HOXA9-202ENST00000396345 PARS2Q7L3T8 475 aaKnown RBP19.41■□□□□ 0.7
HOXA9-202ENST00000396345 ADAT2Q7Z6V5 191 aaKnown RBP19.41■□□□□ 0.7
HOXA9-202ENST00000396345 TMEFF1Q8IYR6 380 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.41■□□□□ 0.7
HOXA9-202ENST00000396345 DEFB119Q8N690 84 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 CNTD1Q8N815 330 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 HCAR2Q8TDS4 363 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 HTR3CQ8WXA8 447 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 FAM131CQ96AQ9 280 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 PBKQ96KB5 322 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 NSMCE3Q96MG7 304 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 FERMT1Q9BQL6 677 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 DKK3Q9UBP4 350 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 SMG5Q9UPR3 1016 aaKnown RBP19.41■□□□□ 0.7
HOXA9-202ENST00000396345 R3HDM2Q9Y2K5 976 aaKnown RBP19.41■□□□□ 0.7
HOXA9-202ENST00000396345 ANKRD36A6QL64 1941 aa19.41■□□□□ 0.7
HOXA9-202ENST00000396345 LRRC72A6NJI9 287 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 ADRB3P13945 408 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 RBL1P28749 1068 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 ADPRHP54922 357 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 DSC2Q02487 901 aa19.4■□□□□ 0.7
HOXA9-202ENST00000396345 WASHC5Q12768 1159 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms