RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 DLDP09622 509 aaKnown RBP12.27□□□□□ -0.44
ITGB1-202ENST00000396033 HADHAP40939 763 aa12.27□□□□□ -0.44
ITGB1-202ENST00000396033 CTBP1Q13363 440 aa12.27□□□□□ -0.44
ITGB1-202ENST00000396033 CCDC153Q494R4 210 aa12.27□□□□□ -0.44
ITGB1-202ENST00000396033 MBLAC2Q68D91 279 aa12.27□□□□□ -0.44
ITGB1-202ENST00000396033 TBC1D1Q86TI0 1168 aaPredicted RBP12.27□□□□□ -0.44
ITGB1-202ENST00000396033 ARID3BQ8IVW6 561 aaPredicted RBP12.27□□□□□ -0.44
ITGB1-202ENST00000396033 CMTR2Q8IYT2 770 aaKnown RBP12.27□□□□□ -0.44
ITGB1-202ENST00000396033 PLD6Q8N2A8 252 aaKnown RBP12.27□□□□□ -0.44
ITGB1-202ENST00000396033 GIMAP7Q8NHV1 300 aa12.27□□□□□ -0.44
ITGB1-202ENST00000396033 TRMT2BQ96GJ1 504 aaKnown RBP12.27□□□□□ -0.44
ITGB1-202ENST00000396033 MAGEH1Q9H213 219 aa12.27□□□□□ -0.44
ITGB1-202ENST00000396033 C11orf49Q9H6J7 331 aa12.27□□□□□ -0.44
ITGB1-202ENST00000396033 KCNK13Q9HB14 408 aa12.27□□□□□ -0.44
ITGB1-202ENST00000396033 CFAP73A6NFT4 308 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 GJB3O75712 270 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 KLKB1P03952 638 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 C2P06681 752 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 CA8P35219 290 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 RAB33AQ14088 237 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 IHHQ14623 411 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 USP10Q14694 798 aaKnown RBP12.27□□□□□ -0.45
ITGB1-202ENST00000396033 ZNF470Q6ECI4 717 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 DDX53Q86TM3 631 aaKnown RBP12.27□□□□□ -0.45
ITGB1-202ENST00000396033 C10orf107Q8IVU9 208 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 KLHL29Q96CT2 875 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 PAWRQ96IZ0 340 aaKnown RBP12.27□□□□□ -0.45
ITGB1-202ENST00000396033 FAM167BQ9BTA0 163 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 SPON2Q9BUD6 331 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 RNF38Q9H0F5 515 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 PDFQ9HBH1 243 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 COPG2Q9UBF2 871 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 MARCOQ9UEW3 520 aaPredicted RBP12.27□□□□□ -0.45
ITGB1-202ENST00000396033 UNC5CO95185 931 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 AHSGP02765 367 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 KITP10721 976 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 MYL2P10916 166 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 FGF3P11487 239 aaPredicted RBP12.27□□□□□ -0.45
ITGB1-202ENST00000396033 SKIV2L2P42285 1042 aaKnown RBP12.27□□□□□ -0.45
ITGB1-202ENST00000396033 SLC1A2P43004 574 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 TAF1BQ53T94 588 aaPredicted RBP12.27□□□□□ -0.45
ITGB1-202ENST00000396033 ZNF599Q96NL3 588 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 YME1L1Q96TA2 773 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 THAP1Q9NVV9 213 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 HEY2Q9UBP5 337 aa12.27□□□□□ -0.45
ITGB1-202ENST00000396033 C2orf71A6NGG8 1288 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 MUSKO15146 869 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 CLDN11O75508 207 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TIMP1P01033 207 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 ACRP10323 421 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TARSP26639 723 aaKnown RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 HOXD9P28356 352 aaPredicted RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 GABRB3P28472 473 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 SGSHP51688 502 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 ZBTB16Q05516 673 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 SIRPB2Q5JXA9 342 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 BBS5Q8N3I7 341 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 OR52K2Q8NGK3 314 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 IFT43Q96FT9 208 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 RANBP9Q96S59 729 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TRPC7Q9HCX4 862 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 MRPL17Q9NRX2 175 aaKnown RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 SMPD4Q9NXE4 827 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TLK1Q9UKI8 766 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 INSL5Q9Y5Q6 135 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TRIM43BA6NCK2 446 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TSPAN3O60637 253 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 RHOCP08134 193 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 AVPR1AP37288 418 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 EPHB3P54753 998 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 OXCT1P55809 520 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 SNCBQ16143 134 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TSTD2Q5T7W7 516 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 DNAJB7Q7Z6W7 309 aaPredicted RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 CLEC14AQ86T13 490 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 SLC41A1Q8IVJ1 513 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TNS4Q8IZW8 715 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 KIF2BQ8N4N8 673 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 MAGEC3Q8TD91 643 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TADA1Q96BN2 335 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TRIM43Q96BQ3 446 aaPredicted RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TSNARE1Q96NA8 513 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 C20orf27Q9GZN8 174 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 RETREG1Q9H6L5 497 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 EBF2Q9HAK2 575 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 AGO1Q9UL18 857 aaKnown RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TRIM33Q9UPN9 1127 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 ACTL7AQ9Y615 435 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 H3BNC9 293 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 PHGDHO43175 533 aaKnown RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 SERPINE1P05121 402 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 MBL2P11226 248 aaPredicted RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 RAG1P15918 1043 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 ARMC3Q5W041 872 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 WBP2Q969T9 261 aa12.26□□□□□ -0.45
ITGB1-202ENST00000396033 TACO1Q9BSH4 297 aaKnown RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 KLF16Q9BXK1 252 aaPredicted RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 UBA2Q9UBT2 640 aaPredicted RBP12.26□□□□□ -0.45
ITGB1-202ENST00000396033 MKI67P46013 3256 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms