RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PPARGP37231 505 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 RBBP7Q16576 425 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 WSCD1Q658N2 575 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 FSTL5Q8N475 847 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 NIPA2Q8N8Q9 360 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 RMDN1Q96DB5 314 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 BEGAINQ9BUH8 593 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 DRC3Q9H069 523 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 EPS8L2Q9H6S3 715 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 KIF13BQ9NQT8 1826 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 JUNP05412 331 aaKnown RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 OCM2P0CE71 109 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 OCMP0CE72 109 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 CRABP2P29373 138 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 CDH5P33151 784 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 GRIA2P42262 883 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 NR1H2P55055 460 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 NRG1Q02297 640 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 LPIN1Q14693 890 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 SYPL2Q5VXT5 272 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 CPNE1Q99829 537 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 KLHL25Q9H0H3 589 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 AP5M1Q9H0R1 490 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 RERGLQ9H628 205 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 MID1IP1Q9NPA3 183 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 SEMA4BQ9NPR2 832 aaPredicted RBP13.36□□□□□ -0.27
NFKB1-202ENST00000394820 NDUFA13Q9P0J0 144 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 ASB3Q9Y575 518 aa13.36□□□□□ -0.27
NFKB1-202ENST00000394820 GON4LQ3T8J9 2241 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 MEIS3P2A8K0S8 358 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 E7ENX8 843 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 BIRC5O15392 142 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 KATNA1O75449 491 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 ENPEPQ07075 957 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 NFYCQ13952 458 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 CEACAM7Q14002 265 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 CCL14Q16627 93 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 ESRP1Q6NXG1 681 aaKnown RBP13.35□□□□□ -0.27
NFKB1-202ENST00000394820 ANGPTL8Q6UXH0 198 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 PATL1Q86TB9 770 aaKnown RBP13.35□□□□□ -0.27
NFKB1-202ENST00000394820 PPHLN1Q8NEY8 458 aaKnown RBP13.35□□□□□ -0.27
NFKB1-202ENST00000394820 NPLOC4Q8TAT6 608 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 BRI3BPQ8WY22 251 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 FRMD8P1Q9BZ68 369 aaPredicted RBP13.35□□□□□ -0.27
NFKB1-202ENST00000394820 NT5MQ9NPB1 228 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 PCDH12Q9NPG4 1184 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 PKD2L2Q9NZM6 624 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 SMIM28A0A1B0GU29 152 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 MYO1GB0I1T2 1018 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.35□□□□□ -0.27
NFKB1-202ENST00000394820 C9IYK1 514 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 RNASEH2AO75792 299 aaKnown RBP13.35□□□□□ -0.27
NFKB1-202ENST00000394820 ASLP04424 464 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 GGT5P36269 586 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 CCNG1P51959 295 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 C21orf59P57076 290 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 GJA9P57773 515 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 MADCAM1Q13477 382 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 PFKFB4Q16877 469 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 GRTP1Q5TC63 336 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 DDI1Q8WTU0 396 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 CANT1Q8WVQ1 401 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 TMEM40Q8WWA1 233 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 GBA2Q9HCG7 927 aaPredicted RBP13.35□□□□□ -0.27
NFKB1-202ENST00000394820 VTA1Q9NP79 307 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 ARHGEF4Q9NR80 690 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 TIMM22Q9Y584 194 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 AP3B1O00203 1094 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 NRP1O14786 923 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 ALBP02768 609 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 PFKMP08237 780 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 LINC00032P0C843 101 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 MTHFD1P11586 935 aaKnown RBP13.35□□□□□ -0.27
NFKB1-202ENST00000394820 CHRM3P20309 590 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 BNIP3Q12983 259 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 CCDC153Q494R4 210 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 TMTC4Q5T4D3 741 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 C9orf57Q5W0N0 161 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 PLEKHH3Q7Z736 793 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 RALGPS2Q86X27 583 aaPredicted RBP13.35□□□□□ -0.27
NFKB1-202ENST00000394820 RELL1Q8IUW5 271 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 FNIP1Q8TF40 1166 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 TKTL2Q9H0I9 626 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 UBAP1Q9NZ09 502 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 ANGPTL3Q9Y5C1 460 aa13.35□□□□□ -0.27
NFKB1-202ENST00000394820 SH3BGRLO75368 114 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 MYCP01106 439 aaPredicted RBP13.34□□□□□ -0.27
NFKB1-202ENST00000394820 ITGB6P18564 788 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 CDKL1Q00532 357 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 GNA12Q03113 381 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 OCA2Q04671 838 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 MSLNQ13421 630 aaPredicted RBP13.34□□□□□ -0.27
NFKB1-202ENST00000394820 TLK2Q86UE8 772 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 FAM35AQ86V20 835 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 FCRL3Q96P31 734 aaPredicted RBP13.34□□□□□ -0.27
NFKB1-202ENST00000394820 SYT17Q9BSW7 474 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 THUMPD3Q9BV44 507 aaKnown RBP13.34□□□□□ -0.27
NFKB1-202ENST00000394820 SSU72Q9NP77 194 aaKnown RBP13.34□□□□□ -0.27
NFKB1-202ENST00000394820 MPP6Q9NZW5 540 aa13.34□□□□□ -0.27
NFKB1-202ENST00000394820 PSMA4P25789 261 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms