RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 DRC3Q9H069 523 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 OSBPL2Q9H1P3 480 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 GMPR2Q9P2T1 348 aaKnown RBP13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 HDAC3O15379 428 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 TIMM44O43615 452 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 GJB3O75712 270 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 FBXO21O94952 628 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 OR6B1O95007 311 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 HLA-DQB2P05538 268 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 LIPMQ5VYY2 423 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 AAGABQ6PD74 315 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 METTL23Q86XA0 190 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 STYXQ8WUJ0 223 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 ELMO2Q96JJ3 720 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 KIFC1Q9BW19 673 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 KLHL4Q9C0H6 718 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 RHOJQ9H4E5 214 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 RAP2CQ9Y3L5 183 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 PTCH2Q9Y6C5 1203 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 NLRC5Q86WI3 1866 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 MYLKQ15746 1914 aa13.64□□□□□ -0.23
GTF2F1-201ENST00000394456 FAM95CA0A1B0GW59 222 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 VCLP18206 1134 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 CST5P28325 142 aaPredicted RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 ARCN1P48444 511 aaKnown RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 NPY2RP49146 381 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 MAXP61244 160 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 PPP1R3AQ16821 1122 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 ARL13BQ3SXY8 428 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 INTS6LQ5JSJ4 861 aaKnown RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 PM20D1Q6GTS8 502 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 OVOS1Q6IE37 1185 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 PKN3Q6P5Z2 889 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 GK5Q6ZS86 529 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 PDZD4Q76G19 769 aaPredicted RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 RNF180Q86T96 592 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 LILRA2Q8N149 483 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 RSPH1Q8WYR4 309 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 PPP2R3CQ969Q6 453 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 TBL1YQ9BQ87 522 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 RTKNQ9BST9 563 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 A0A1B0GVG6 124 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 TMEM114B3SHH9 223 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 MAFKO60675 156 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 TRPA1O75762 1119 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 CKBP12277 381 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 CSE1LP55060 971 aaKnown RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 MBTPS1Q14703 1052 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 FSCBQ5H9T9 825 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 ZNF470Q6ECI4 717 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 ITPRIPL1Q6GPH6 555 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 RTN4RL1Q86UN2 441 aaPredicted RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 ZNF280BQ86YH2 543 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 HEXDCQ8WVB3 486 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 CASP10Q92851 521 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 TMA16Q96EY4 203 aaKnown RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 GBP5Q96PP8 586 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 OLFM1Q99784 485 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 GPBP1L1Q9HC44 474 aaPredicted RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 TRHDEQ9UKU6 1024 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 COPG1Q9Y678 874 aaKnown RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 PAGE1O75459 146 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 PGM3O95394 542 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 FESP07332 822 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 MYL4P12829 197 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 HCAR3P49019 387 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 PAPOLAP51003 745 aaKnown RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 HNRNPDQ14103 355 aaKnown RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 CSHL1Q14406 222 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 TLR1Q15399 786 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 SLC30A9Q6PML9 568 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 PAOXQ6QHF9 649 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 PCDH20Q8N6Y1 951 aaKnown RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 KDM1BQ8NB78 822 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 HMGCLL1Q8TB92 370 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 SLC45A3Q96JT2 553 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 KLHL5Q96PQ7 755 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 ACBD6Q9BR61 282 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 COPS7BQ9H9Q2 264 aaPredicted RBP13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 UBAP1Q9NZ09 502 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 DNAJB4Q9UDY4 337 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 SRRDQ9UH36 339 aa13.63□□□□□ -0.23
GTF2F1-201ENST00000394456 FRMPD3Q5JV73 1810 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 A0A1B0GTW7 788 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 OR51F1A6NGY5 319 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 RPLP2P05387 115 aaKnown RBP13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 NOGQ13253 232 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 ZNF423Q2M1K9 1284 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 SH2D4BQ5SQS7 431 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 NAPEPLDQ6IQ20 393 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 FAM171BQ6P995 826 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 TFAP2DQ7Z6R9 452 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 ATPAF2Q8N5M1 289 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 PGAP3Q96FM1 320 aaPredicted RBP13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 KLHL32Q96NJ5 620 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 NR1H4Q96RI1 486 aaPredicted RBP13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 ZNF385DQ9H6B1 395 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 NMUR1Q9HB89 426 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 GLOD4Q9HC38 313 aa13.62□□□□□ -0.23
GTF2F1-201ENST00000394456 KCNU1A8MYU2 1149 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms