RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 SEC16BQ96JE7 1060 aa15.15■□□□□ 0.02
MKS1-202ENST00000393119 CEP295NLQ96MC4 621 aa15.15■□□□□ 0.02
MKS1-202ENST00000393119 SRPK1Q96SB4 655 aaKnown RBP15.15■□□□□ 0.02
MKS1-202ENST00000393119 IL22Q9GZX6 179 aa15.15■□□□□ 0.02
MKS1-202ENST00000393119 ZNF395Q9H8N7 513 aaPredicted RBP15.15■□□□□ 0.02
MKS1-202ENST00000393119 NOD2Q9HC29 1040 aa15.15■□□□□ 0.02
MKS1-202ENST00000393119 TLR9Q9NR96 1032 aa15.15■□□□□ 0.02
MKS1-202ENST00000393119 DNMT3BQ9UBC3 853 aaKnown RBP15.15■□□□□ 0.02
MKS1-202ENST00000393119 CDH22Q9UJ99 828 aa15.15■□□□□ 0.02
MKS1-202ENST00000393119 USP1O94782 785 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 SAT1P21673 171 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 SP100P23497 879 aaPredicted RBP15.14■□□□□ 0.01
MKS1-202ENST00000393119 GABRB3P28472 473 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 NPY2RP49146 381 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 SCNN1BP51168 640 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 MPP1Q00013 466 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 SIRPB2Q5JXA9 342 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 SPANXN3Q5MJ09 141 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 RABGAP1LQ5R372 815 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 CES4AQ5XG92 561 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 PSRC1Q6PGN9 363 aaPredicted RBP15.14■□□□□ 0.01
MKS1-202ENST00000393119 LDB1Q86U70 411 aaPredicted RBP15.14■□□□□ 0.01
MKS1-202ENST00000393119 ITIH5Q86UX2 942 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 APCDD1Q8J025 514 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 NDUFAF2Q8N183 169 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 C12orf76Q8N812 135 aaPredicted RBP15.14■□□□□ 0.01
MKS1-202ENST00000393119 MAN1C1Q9NR34 630 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 HAUS2Q9NVX0 235 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 MTO1Q9Y2Z2 717 aaKnown RBP15.14■□□□□ 0.01
MKS1-202ENST00000393119 PRUNE2Q8WUY3 3088 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 FAM237BA0A1B0GVD1 139 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 OR51F1A6NGY5 319 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 H0Y626 953 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 MOSPD3O75425 235 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 KRT37O76014 449 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 OLFM2O95897 454 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 ITGA2BP08514 1039 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 GSTA2P09210 222 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 NEK3P51956 506 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 TMPRSS15P98073 1019 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 SLC18A2Q05940 514 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 MSLNQ13421 630 aaPredicted RBP15.14■□□□□ 0.01
MKS1-202ENST00000393119 ZNF235Q14590 738 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 CYTH1Q15438 398 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 TEAD2Q15562 447 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 HHATQ5VTY9 493 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 PKN3Q6P5Z2 889 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 MARK2Q7KZI7 788 aaKnown RBP15.14■□□□□ 0.01
MKS1-202ENST00000393119 ADGRD2Q7Z7M1 963 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 OR6K2Q8NGY2 324 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 SHKBP1Q8TBC3 707 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 MRPS31Q92665 395 aaKnown RBP15.14■□□□□ 0.01
MKS1-202ENST00000393119 ZSWIM3Q96MP5 696 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 KIFC1Q9BW19 673 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 ZNF180Q9UJW8 692 aa15.14■□□□□ 0.01
MKS1-202ENST00000393119 CLDN11O75508 207 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 ATXN1LP0C7T5 689 aaKnown RBP15.13■□□□□ 0.01
MKS1-202ENST00000393119 CSKP41240 450 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 OXCT1P55809 520 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 YBEYP58557 167 aaPredicted RBP15.13■□□□□ 0.01
MKS1-202ENST00000393119 ZNF789Q5FWF6 425 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 PPM1LQ5SGD2 360 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 Q6ZNB5 142 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 ING5Q8WYH8 240 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 TMA16Q96EY4 203 aaKnown RBP15.13■□□□□ 0.01
MKS1-202ENST00000393119 UNKQ9C0B0 810 aaKnown RBP15.13■□□□□ 0.01
MKS1-202ENST00000393119 KDM4CQ9H3R0 1056 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 CCDC134Q9H6E4 229 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 SUDS3Q9H7L9 328 aaPredicted RBP15.13■□□□□ 0.01
MKS1-202ENST00000393119 PPCSQ9HAB8 311 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 SMG5Q9UPR3 1016 aaKnown RBP15.13■□□□□ 0.01
MKS1-202ENST00000393119 CHKBQ9Y259 395 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 FCF1Q9Y324 198 aaKnown RBP15.13■□□□□ 0.01
MKS1-202ENST00000393119 PCDHGC4Q9Y5F7 938 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 MYLKQ15746 1914 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 A0A1B0GVM2 712 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 TCAF2A6NFQ2 919 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 DNAJC6O75061 913 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 PDHA1P08559 390 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 SLC8A1P32418 973 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 GBP2P32456 591 aaPredicted RBP15.13■□□□□ 0.01
MKS1-202ENST00000393119 ETV4P43268 484 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 ARSDP51689 593 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 PDE1CQ14123 709 aaPredicted RBP15.13■□□□□ 0.01
MKS1-202ENST00000393119 ZNF460Q14592 562 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 PCID2Q5JVF3 399 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 TMCO4Q5TGY1 634 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 LINC00523Q86TU6 105 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 LRRC49Q8IUZ0 686 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 DCLK2Q8N568 766 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 ARMC2Q8NEN0 867 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 DDI1Q8WTU0 396 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 NSMCE1Q8WV22 266 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 APOPT1Q96IL0 206 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 SENP1Q9P0U3 644 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 MTF2Q9Y483 593 aaPredicted RBP15.13■□□□□ 0.01
MKS1-202ENST00000393119 ARL5AQ9Y689 179 aa15.13■□□□□ 0.01
MKS1-202ENST00000393119 CCDC195A0A1B0GUA6 201 aa15.12■□□□□ 0.01
MKS1-202ENST00000393119 LEFTY2O00292 366 aa15.12■□□□□ 0.01
MKS1-202ENST00000393119 COPEO14579 308 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms