RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 IGLV3-25P01717 112 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 RBP3P10745 1247 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 RARGP13631 454 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 ADCY8P40145 1251 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 FPGSQ05932 587 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 POTEHQ6S545 545 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 ARHGEF18Q6ZSZ5 1173 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 CLNKQ7Z7G1 428 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 CCDC110Q8TBZ0 833 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 GRK7Q8WTQ7 553 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 MRPS26Q9BYN8 205 aaKnown RBP19.24■□□□□ 0.67
CCDC50-202ENST00000392456 TKTL2Q9H0I9 626 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 WDCPQ9H6R7 721 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 IL37Q9NZH6 218 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 DRG1Q9Y295 367 aaKnown RBP19.24■□□□□ 0.67
CCDC50-202ENST00000392456 HEMK1Q9Y5R4 338 aaPredicted RBP19.24■□□□□ 0.67
CCDC50-202ENST00000392456 COL4A4P53420 1690 aaPredicted RBP19.23■□□□□ 0.67
CCDC50-202ENST00000392456 SGK1O00141 431 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 APOL1O14791 398 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 ITGAVP06756 1048 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 CDH2P19022 906 aaPredicted RBP19.23■□□□□ 0.67
CCDC50-202ENST00000392456 CXCR3P49682 368 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 KPNA1P52294 538 aaPredicted RBP19.23■□□□□ 0.67
CCDC50-202ENST00000392456 DLG1Q12959 904 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 TAF10Q12962 218 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 NOMO1Q15155 1222 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 KCNJ8Q15842 424 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 RFPL4BQ6ZWI9 263 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 TP53INP2Q8IXH6 220 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 VPS52Q8N1B4 723 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 CENPSQ8N2Z9 138 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 TAB3Q8N5C8 712 aaPredicted RBP19.23■□□□□ 0.67
CCDC50-202ENST00000392456 UNKQ9C0B0 810 aaKnown RBP19.23■□□□□ 0.67
CCDC50-202ENST00000392456 MRGBPQ9NV56 204 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 SPG21Q9NZD8 308 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 PRKAG2Q9UGJ0 569 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 BACE2Q9Y5Z0 518 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 CEPT1Q9Y6K0 416 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 K7EPI3 171 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 USP1O94782 785 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 ESRRAP11474 423 aaPredicted RBP19.23■□□□□ 0.67
CCDC50-202ENST00000392456 RAP1GDS1P52306 607 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 AP2B1P63010 937 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 TFDP2Q14188 446 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 FAM71DQ8N9W8 422 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 RNF139Q8WU17 664 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 ART4Q93070 314 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 ARHGEF4Q9NR80 690 aa19.23■□□□□ 0.67
CCDC50-202ENST00000392456 LCHNA4D1U4 455 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 AQP9O43315 295 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 BRAFP15056 766 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 YWHAQP27348 245 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 PDAP1Q13442 181 aaKnown RBP19.22■□□□□ 0.67
CCDC50-202ENST00000392456 MON1AQ86VX9 555 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 LSMEM2Q8N112 164 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 TTC13Q8NBP0 860 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 MED30Q96HR3 178 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 B3GNT4Q9C0J1 378 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 RRN3Q9NYV6 651 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 XPO7Q9UIA9 1087 aaKnown RBP19.22■□□□□ 0.67
CCDC50-202ENST00000392456 MAGED2Q9UNF1 606 aaPredicted RBP19.22■□□□□ 0.67
CCDC50-202ENST00000392456 PDE4DIPQ5VU43 2346 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 FAM92AA1XBS5 289 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 CSPG5O95196 566 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 LAG3P18627 525 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 ATP5DP30049 168 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 HMOX2P30519 316 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 GLUD2P49448 558 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 EFHC2Q5JST6 749 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 NCBP2-AS2Q69YL0 99 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 SPRED2Q7Z698 418 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 ACTRT2Q8TDY3 377 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 SLC9A7Q96T83 725 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 MAN1C1Q9NR34 630 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 FKBP14Q9NWM8 211 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 SATB2Q9UPW6 733 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 MAD1L1Q9Y6D9 718 aa19.22■□□□□ 0.67
CCDC50-202ENST00000392456 IRAK2O43187 625 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 PCYT1AP49585 367 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 ITGA8P53708 1063 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 SEMA3BQ13214 749 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 PPIGQ13427 754 aaKnown RBP eCLIP19.21■□□□□ 0.678e-9■■□□□ 13.7
CCDC50-202ENST00000392456 ADGRG6Q86SQ4 1221 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 RNF34Q969K3 372 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 FBXO32Q969P5 355 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 NTAN1Q96AB6 310 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 FBXO44Q9H4M3 255 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 ARL8BQ9NVJ2 186 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 LZTS1Q9Y250 596 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 MYO16Q9Y6X6 1858 aa19.21■□□□□ 0.67
CCDC50-202ENST00000392456 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 H3BSA7 217 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 BAG2O95816 211 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 F9P00740 461 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 CHKAP35790 457 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 HTRA4P83105 476 aaPredicted RBP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 XIAPP98170 497 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 SPCS2Q15005 226 aa19.2■□□□□ 0.66
CCDC50-202ENST00000392456 SF3B4Q15427 424 aaKnown RBP eCLIP19.2■□□□□ 0.66
CCDC50-202ENST00000392456 FBXL19Q6PCT2 694 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms