RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 LEFTY1O75610 366 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 RNASEH2AO75792 299 aaKnown RBP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 LMNAP02545 664 aaKnown RBP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 CTSLP07711 333 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 NFKBIAP25963 317 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 ITGB7P26010 798 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 SERPINA4P29622 427 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 DRD3P35462 400 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 NUDT1P36639 197 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 PSMD8P48556 350 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 SCNN1BP51168 640 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 IFI35P80217 286 aaPredicted RBP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 NHLH1Q02575 133 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 BCL2L1Q07817 233 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 ADCY2Q08462 1091 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 AP1B1Q10567 949 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 NOMO1Q15155 1222 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 PLK5Q496M5 336 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 TEX44Q53QW1 395 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 ZNF805Q5CZA5 627 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 ZNF569Q5MCW4 686 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 SYCP2LQ5T4T6 812 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 SEL1L2Q5TEA6 688 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 ALG1LQ6GMV1 187 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 LAIR1Q6GTX8 287 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 NEK5Q6P3R8 708 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 GDPD4Q6W3E5 623 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 LEKR1Q6ZMV7 388 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 ERN2Q76MJ5 926 aaKnown RBP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 LPCAT2Q7L5N7 544 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 NETO2Q8NC67 525 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 CHST14Q8NCH0 376 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 GANCQ8TET4 914 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 RLN3Q8WXF3 142 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 NKD2Q969F2 451 aaPredicted RBP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 TOE1Q96GM8 510 aaKnown RBP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 ZNF419Q96HQ0 510 aaPredicted RBP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 PBKQ96KB5 322 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 NUDCD1Q96RS6 583 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 KCNK17Q96T54 332 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 LGMNQ99538 433 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 IL12RB2Q99665 862 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 MGME1Q9BQP7 344 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 TLR10Q9BXR5 811 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 SLC6A17Q9H1V8 727 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 NEUROG2Q9H2A3 272 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 SUV39H2Q9H5I1 410 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 ZDHHC6Q9H6R6 413 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 ATP13A3Q9H7F0 1226 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 RBM22Q9NW64 420 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 TRMT1Q9NXH9 659 aaKnown RBP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 DKK3Q9UBP4 350 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 EVLQ9UI08 416 aaPredicted RBP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 TRHDEQ9UKU6 1024 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 SARDHQ9UL12 918 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 CYP8B1Q9UNU6 501 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 ATP8A1Q9Y2Q0 1164 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 PCDHGA5Q9Y5G8 931 aa6.85□□□□□ -1.31
UBBP1-201ENST00000392399 RIF1Q5UIP0 2472 aaKnown RBP6.85□□□□□ -1.31
UBBP1-201ENST00000392399 PIEZO1Q92508 2521 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 A0A1W2PP55 124 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 BCLAF3A2AJT9 711 aaKnown RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 C16orf96A6NNT2 1141 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 H7C0C1 242 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 CES2O00748 559 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 INSIG1O15503 277 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 PLRG1O43660 514 aaKnown RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 AP1G1O43747 822 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 SOCS5O75159 536 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 MAP3K6O95382 1288 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 SEMA4FO95754 770 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 JCHAINP01591 159 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 TUBB4AP04350 444 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 UGT2B4P06133 528 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 RETP07949 1114 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 SERPINF2P08697 491 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 RBP3P10745 1247 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 PECAM1P16284 738 aaPredicted RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 PRLRP16471 622 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 CR2P20023 1033 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 CA4P22748 312 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 STIP1P31948 543 aaKnown RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 HOXD12P35452 270 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 ATP5OP48047 213 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 NEK3P51956 506 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 OTUD4Q01804 1114 aaKnown RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 RPL6Q02878 288 aaKnown RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 KLF1Q13351 362 aaPredicted RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 PRKD1Q15139 912 aaPredicted RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 LLGL1Q15334 1064 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 SLC45A4Q5BKX6 768 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 WDR45BQ5MNZ6 344 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 CFAP58Q5T655 872 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 ATXN7L2Q5T6C5 722 aaPredicted RBP6.84□□□□□ -1.31
UBBP1-201ENST00000392399 DCAF12L1Q5VU92 463 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 PMS2CLQ68D20 193 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 FBXL19Q6PCT2 694 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 NCEH1Q6PIU2 408 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 BRAT1Q6PJG6 821 aa6.84□□□□□ -1.31
UBBP1-201ENST00000392399 NPNTQ6UXI9 565 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms