RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 INTS2Q9H0H0 1204 aaKnown RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 MMADHCQ9H3L0 296 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CXorf36Q9H7Y0 433 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 ERVMER34-1Q9H9K5 563 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 GBA2Q9HCG7 927 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 DCAF16Q9NXF7 216 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 TUBA8Q9NY65 449 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 NDUFAF4Q9P032 175 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CFAP97Q9P2B7 532 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 KLHL13Q9P2N7 655 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CNOT7Q9UIV1 285 aaKnown RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 RAB21Q9UL25 225 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 MKLN1Q9UL63 735 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZBTB1Q9Y2K1 713 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 KCNE2Q9Y6J6 123 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 WDR17Q8IZU2 1322 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 GXYLT2A0PJZ3 443 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 DNM1LO00429 736 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ADAM10O14672 748 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 CD3EAPO15446 510 aaKnown RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 PAPSS1O43252 624 aaPredicted RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 CTIFO43310 598 aaKnown RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 TSPAN3O60637 253 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 SMPD2O60906 423 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 KAT7O95251 611 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 GCNT3O95395 438 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 VNN1O95497 513 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 BAG2O95816 211 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 GUCA1CO95843 209 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 OLFM2O95897 454 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 CHEK2O96017 543 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 EIF2S1P05198 315 aaKnown RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 TPOP07202 933 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 FESP07332 822 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 THEGLP0DJG4 465 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ARSAP15289 507 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ENGP17813 658 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 HOXC8P31273 242 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 MCM2P49736 904 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 THBS3P49746 956 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 DGKEP52429 567 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ARFIP1P53367 373 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 LIMK1P53667 647 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 TIRAPP58753 221 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 EIF4A1P60842 406 aaKnown RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 RPL15P61313 204 aaKnown RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 UBXN1Q04323 297 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 KLHL30Q0D2K2 578 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 GPS1Q13098 491 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 SMC1AQ14683 1233 aaKnown RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 FAM153CQ494X1 144 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 PREPLQ4J6C6 727 aaPredicted RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 TMEM196Q5HYL7 178 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 CCDC158Q5M9N0 1113 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 PLEKHS1Q5SXH7 462 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ZNF618Q5T7W0 954 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ARHGAP40Q5TG30 622 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 CACHD1Q5VU97 1274 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 FAM160B1Q5W0V3 765 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 FAM90A2PQ658T7 463 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 HIST2H2BCQ6DN03 193 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 HIST2H2BDQ6DRA6 164 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 SERPINA13PQ6UXR4 307 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 WDR53Q7Z5U6 358 aaPredicted RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 UBE2Q1Q7Z7E8 422 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 DSG4Q86SJ6 1040 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 KBTBD6Q86V97 674 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ERC1Q8IUD2 1116 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 CNTN4Q8IWV2 1026 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ADGRF2Q8IZF7 708 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 TAGAPQ8N103 731 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 PELI3Q8N2H9 469 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 FSTL5Q8N475 847 aaPredicted RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 AOPEPQ8N6M6 819 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 C11orf44Q8N8P7 122 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 C16orf52Q8NHV5 167 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 MAFAQ8NHW3 353 aaPredicted RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 SPATA3Q8NHX4 192 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ETNPPLQ8TBG4 499 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 UTP15Q8TED0 518 aaKnown RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 SCFD2Q8WU76 684 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 CPT1BQ92523 772 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 NPIPB3Q92617 1050 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 GLG1Q92896 1179 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 CTHRC1Q96CG8 243 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 GRAMD1AQ96CP6 724 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 PDLIM5Q96HC4 596 aaKnown RBP2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 SPATA17Q96L03 361 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 MARK4Q96L34 752 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 AK8Q96MA6 479 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 ATP6V0BQ99437 205 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 PAAF1Q9BRP4 392 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 TUBB6Q9BUF5 446 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 APOL6Q9BWW8 343 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 TRIM5Q9C035 493 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 VPS33BQ9H267 617 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 EBF3Q9H4W6 596 aa2.27□□□□□ -2.05
SNORA40.19-201ENST00000390846 RABEP2Q9H5N1 569 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms