RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MASTLQ96GX5 879 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 RBM17Q96I25 401 aaKnown RBP3.49□□□□□ -1.85
TRAV40-201ENST00000390467 DUX5Q96PT3 197 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 CHODLQ9H9P2 273 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 DONSONQ9NYP3 566 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 TAGLN3Q9UI15 199 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 CLDN16Q9Y5I7 305 aa3.49□□□□□ -1.85
TRAV40-201ENST00000390467 MORC2Q9Y6X9 1032 aaPredicted RBP3.49□□□□□ -1.85
TRAV40-201ENST00000390467 IGLV5-37A0A075B6J1 123 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 STX16-NPEPL1H3BU86 382 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 STX16O14662 325 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 SLC25A17O43808 307 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 FAM155BO75949 473 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 IL1AP01583 271 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 DAOP14920 347 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 TTKP33981 857 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 DLG1Q12959 904 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 LPIN1Q14693 890 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 ZRSR1Q15695 479 aaKnown RBP3.48□□□□□ -1.85
TRAV40-201ENST00000390467 KIF26BQ2KJY2 2108 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 MYLK4Q86YV6 388 aaPredicted RBP3.48□□□□□ -1.85
TRAV40-201ENST00000390467 THAP4Q8WY91 577 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 NODALQ96S42 347 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 PCGF6Q9BYE7 350 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 SPRY4Q9C004 299 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 SDF2L1Q9HCN8 221 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 MALT1Q9UDY8 824 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 CD207Q9UJ71 328 aa3.48□□□□□ -1.85
TRAV40-201ENST00000390467 A0A0B4J293 547 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 CH25HO95992 272 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 SERPINC1P01008 464 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 SSTR2P30874 369 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 FMO4P31512 558 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 ADD2P35612 726 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 HNF1BP35680 557 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 RPL3P39023 403 aaKnown RBP3.47□□□□□ -1.85
TRAV40-201ENST00000390467 CENPAP49450 140 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 MCM2P49736 904 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 ARSFP54793 590 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 UBE4AQ14139 1066 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 XKR9Q5GH70 373 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 FAM69BQ5VUD6 431 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 NCAPH2Q6IBW4 605 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 RHBDF2Q6PJF5 856 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 SMIM29Q86T20 159 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 DENND6AQ8IWF6 608 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 MB21D2Q8IYB1 491 aaPredicted RBP3.47□□□□□ -1.85
TRAV40-201ENST00000390467 CCDC105Q8IYK2 499 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 AADATQ8N5Z0 425 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 ARRDC2Q8TBH0 407 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 SCMH1Q96GD3 660 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 IL17FQ96PD4 163 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 INPP4AQ96PE3 977 aaPredicted RBP3.47□□□□□ -1.85
TRAV40-201ENST00000390467 YME1L1Q96TA2 773 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 SAYSD1Q9NPB0 183 aa3.47□□□□□ -1.85
TRAV40-201ENST00000390467 PRAC2D3DTV9 90 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 TULP2O00295 520 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 KIF1CO43896 1103 aaKnown RBP3.46□□□□□ -1.86
TRAV40-201ENST00000390467 DHX16O60231 1041 aaKnown RBP3.46□□□□□ -1.86
TRAV40-201ENST00000390467 KRT36O76013 467 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 IGLV2-11P01706 119 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 TK1P04183 234 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 F7P08709 466 aaPredicted RBP3.46□□□□□ -1.86
TRAV40-201ENST00000390467 TCEA1P23193 301 aaKnown RBP3.46□□□□□ -1.86
TRAV40-201ENST00000390467 CXCR3P49682 368 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 BRWD1-AS2P59051 145 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 ST3GAL1Q11201 340 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 CHAF1AQ13111 956 aaPredicted RBP3.46□□□□□ -1.86
TRAV40-201ENST00000390467 POSTNQ15063 836 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 CBWD5Q5RIA9 395 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 CCDC129Q6ZRS4 1044 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 GHDCQ8N2G8 530 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 TRIB2Q92519 343 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 RUBCNQ92622 972 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 CLSTN3Q9BQT9 956 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 NPLQ9BXD5 320 aaPredicted RBP3.46□□□□□ -1.86
TRAV40-201ENST00000390467 LMAN2LQ9H0V9 348 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 OR6C3Q9NZP0 311 aa3.46□□□□□ -1.86
TRAV40-201ENST00000390467 SAA2-SAA4A0A096LPE2 208 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 PRSS47A8MTI9 375 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 B9A039 149 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 BMPR1BO00238 502 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 VNN2O95498 520 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 IGHV4-30-4P0DP06 118 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 MYF6P23409 242 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 CHKAP35790 457 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 HDAC1Q13547 482 aaPredicted RBP3.45□□□□□ -1.86
TRAV40-201ENST00000390467 SLC18A3Q16572 532 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 PLEKHO1Q53GL0 409 aaPredicted RBP3.45□□□□□ -1.86
TRAV40-201ENST00000390467 SUGP1Q8IWZ8 645 aaKnown RBP3.45□□□□□ -1.86
TRAV40-201ENST00000390467 AFG1LQ8WV93 481 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 SORCS1Q8WY21 1168 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 RNF183Q96D59 192 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 BICD1Q96G01 975 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 LTV1Q96GA3 475 aaPredicted RBP3.45□□□□□ -1.86
TRAV40-201ENST00000390467 TTC12Q9H892 705 aaPredicted RBP3.45□□□□□ -1.86
TRAV40-201ENST00000390467 TCF7L2Q9NQB0 619 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 ERRFI1Q9UJM3 462 aaPredicted RBP3.45□□□□□ -1.86
TRAV40-201ENST00000390467 FEM1BQ9UK73 627 aa3.45□□□□□ -1.86
TRAV40-201ENST00000390467 DNAJC16Q9Y2G8 782 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms