RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 TSGA13Q96PP4 275 aa14.02□□□□□ -0.16
NEK4-202ENST00000383721 CCDC28BQ9BUN5 200 aa14.02□□□□□ -0.16
NEK4-202ENST00000383721 NEU3Q9UQ49 428 aa14.02□□□□□ -0.16
NEK4-202ENST00000383721 AP3B1O00203 1094 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 PEX1O43933 1283 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 PIM1P11309 404 aaPredicted RBP14.02□□□□□ -0.17
NEK4-202ENST00000383721 ARNTP27540 789 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 HK2P52789 917 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 PRKAA2P54646 552 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 POLE2P56282 527 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 MRPS6P82932 125 aaKnown RBP14.02□□□□□ -0.17
NEK4-202ENST00000383721 CTBP1Q13363 440 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 POU6F1Q14863 301 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 PCID2Q5JVF3 399 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 DENND5AQ6IQ26 1287 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 LRRC8EQ6NSJ5 796 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 TRAF7Q6Q0C0 670 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 CEP97Q8IW35 865 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 CNTN4Q8IWV2 1026 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 TSNARE1Q96NA8 513 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 GPR78Q96P69 363 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 GAD1Q99259 594 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 FTHL17Q9BXU8 183 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 MIOSQ9NXC5 875 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 XPR1Q9UBH6 696 aa14.02□□□□□ -0.17
NEK4-202ENST00000383721 VAPBO95292 243 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 SRGAP2BP0DMP2 458 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 DNAJB2P25686 324 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 PPARGP37231 505 aaPredicted RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 THOP1P52888 689 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 ROR2Q01974 943 aaKnown RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 CYLC2Q14093 348 aaPredicted RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 TSTD2Q5T7W7 516 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 OGFRL1Q5TC84 451 aaPredicted RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 CWF19L1Q69YN2 538 aaKnown RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 RWDD4Q6NW29 188 aaKnown RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 ESRP1Q6NXG1 681 aaKnown RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 C16orf89Q6UX73 402 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 LCA5Q86VQ0 697 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 ARHGAP12Q8IWW6 846 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 SPATA6LQ8N4H0 392 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 RCN3Q96D15 328 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 SMARCD1Q96GM5 515 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 TOX2Q96NM4 488 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 CATSPER2Q96P56 530 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 CDRT15Q96T59 188 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 TBL1YQ9BQ87 522 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 CSNK1G1Q9HCP0 422 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 CDH9Q9ULB4 789 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 PSMD13Q9UNM6 376 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 INPP5FQ9Y2H2 1132 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 TBC1D30Q9Y2I9 924 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 ACOT9Q9Y305 439 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 BPTFQ12830 3046 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 DFFAO00273 331 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 PSMD3O43242 534 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 COL6A2P12110 1019 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 XRCC1P18887 633 aaPredicted RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 ITGB8P26012 769 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 ARCN1P48444 511 aaKnown RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 MGAT3Q09327 533 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 MBTPS1Q14703 1052 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 ZNF423Q2M1K9 1284 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 GRAMD1BQ3KR37 738 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 MMEL1Q495T6 779 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 PIGGQ5H8A4 983 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 FBXL19Q6PCT2 694 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 PQLC1Q8N2U9 271 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 IPMKQ8NFU5 416 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 DQX1Q8TE96 717 aaKnown RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 RNF34Q969K3 372 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 MYLPFQ96A32 169 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 NXNL1Q96CM4 212 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 PAAF1Q9BRP4 392 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 UNKQ9C0B0 810 aaKnown RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 SLC38A7Q9NVC3 462 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 VTI1BQ9UEU0 232 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 CDYLQ9Y232 598 aa14.01□□□□□ -0.17
NEK4-202ENST00000383721 AAR2Q9Y312 384 aaKnown RBP14.01□□□□□ -0.17
NEK4-202ENST00000383721 SLC22A2O15244 555 aa14□□□□□ -0.17
NEK4-202ENST00000383721 CYP2C18P33260 490 aa14□□□□□ -0.17
NEK4-202ENST00000383721 MSX2P35548 267 aaPredicted RBP14□□□□□ -0.17
NEK4-202ENST00000383721 ALDH1A3P47895 512 aa14□□□□□ -0.17
NEK4-202ENST00000383721 RAB10P61026 200 aa14□□□□□ -0.17
NEK4-202ENST00000383721 COG7P83436 770 aa14□□□□□ -0.17
NEK4-202ENST00000383721 ZNF33AQ06730 810 aa14□□□□□ -0.17
NEK4-202ENST00000383721 GRM2Q14416 872 aa14□□□□□ -0.17
NEK4-202ENST00000383721 LIN52Q52LA3 116 aa14□□□□□ -0.17
NEK4-202ENST00000383721 BNC2Q6ZN30 1099 aaPredicted RBP14□□□□□ -0.17
NEK4-202ENST00000383721 KDM1BQ8NB78 822 aa14□□□□□ -0.17
NEK4-202ENST00000383721 ZFAND2BQ8WV99 257 aa14□□□□□ -0.17
NEK4-202ENST00000383721 LPPQ93052 612 aa14□□□□□ -0.17
NEK4-202ENST00000383721 MARK4Q96L34 752 aa14□□□□□ -0.17
NEK4-202ENST00000383721 FCRL5Q96RD9 977 aa14□□□□□ -0.17
NEK4-202ENST00000383721 SERPINI1Q99574 410 aa14□□□□□ -0.17
NEK4-202ENST00000383721 OMDQ99983 421 aa14□□□□□ -0.17
NEK4-202ENST00000383721 RTP3Q9BQQ7 232 aa14□□□□□ -0.17
NEK4-202ENST00000383721 SEZ6LQ9BYH1 1024 aa14□□□□□ -0.17
NEK4-202ENST00000383721 SIK2Q9H0K1 926 aa14□□□□□ -0.17
NEK4-202ENST00000383721 OSBPL2Q9H1P3 480 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms