RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 ZNF829Q3KNS6 432 aaPredicted RBP5.78□□□□□ -1.48
RFC1-202ENST00000381897 FASTKD1Q53R41 847 aaKnown RBP5.78□□□□□ -1.48
RFC1-202ENST00000381897 TUBA3EQ6PEY2 450 aa5.78□□□□□ -1.48
RFC1-202ENST00000381897 ZBTB49Q6ZSB9 765 aa5.78□□□□□ -1.48
RFC1-202ENST00000381897 HORMAD1Q86X24 394 aa5.78□□□□□ -1.48
RFC1-202ENST00000381897 NDRG1Q92597 394 aaKnown RBP5.78□□□□□ -1.48
RFC1-202ENST00000381897 PRICKLE1Q96MT3 831 aaPredicted RBP5.78□□□□□ -1.48
RFC1-202ENST00000381897 GPATCH1Q9BRR8 931 aaKnown RBP5.78□□□□□ -1.48
RFC1-202ENST00000381897 NIFKQ9BYG3 293 aaKnown RBP5.78□□□□□ -1.48
RFC1-202ENST00000381897 MTG2Q9H4K7 406 aa5.78□□□□□ -1.48
RFC1-202ENST00000381897 ABCB10Q9NRK6 738 aa5.78□□□□□ -1.48
RFC1-202ENST00000381897 IGSF9Q9P2J2 1179 aa5.78□□□□□ -1.48
RFC1-202ENST00000381897 PPM1HQ9ULR3 514 aa5.78□□□□□ -1.48
RFC1-202ENST00000381897 PRR5-ARHGAP8B1AHC4 643 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 F8W810 466 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 PFDN6O15212 129 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 GAS2O43903 313 aaKnown RBP5.77□□□□□ -1.48
RFC1-202ENST00000381897 STAG3L1P0CL83 205 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 AOC1P19801 751 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 PAICSP22234 425 aaKnown RBP5.77□□□□□ -1.48
RFC1-202ENST00000381897 BMXP51813 675 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 OXCT1P55809 520 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 ARHGAP8P85298 464 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 KCNC4Q03721 635 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 SREBF2Q12772 1141 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 PPIL2Q13356 520 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 CBFBQ13951 182 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 MPP2Q14168 576 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 ANGEL2Q5VTE6 544 aaKnown RBP5.77□□□□□ -1.48
RFC1-202ENST00000381897 SLFN12LQ6IEE8 588 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 USP17L6PQ6QN14 398 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 HFE2Q6ZVN8 426 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 KCTD1Q719H9 257 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 FASTKD5Q7L8L6 764 aaKnown RBP5.77□□□□□ -1.48
RFC1-202ENST00000381897 GPD1LQ8N335 351 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 FNIP1Q8TF40 1166 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 SNX19Q92543 992 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 LRCH3Q96II8 777 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 DACH2Q96NX9 599 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 ILKAPQ9H0C8 392 aaPredicted RBP5.77□□□□□ -1.48
RFC1-202ENST00000381897 SLC25A18Q9H1K4 315 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 AAASQ9NRG9 546 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 IL17RBQ9NRM6 502 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 MTMR4Q9NYA4 1195 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 SLC17A7Q9P2U7 560 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 MINPP1Q9UNW1 487 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 NCKAP1Q9Y2A7 1128 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 PCDHGA8Q9Y5G5 932 aa5.77□□□□□ -1.48
RFC1-202ENST00000381897 SPATA31A1Q5TZJ5 1347 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 NWD2Q9ULI1 1742 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 KANSL1LA0AUZ9 987 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SLC22A2O15244 555 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 TYROBPO43914 113 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 ONECUT3O60422 494 aaPredicted RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 CRTAMO95727 393 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 KRT6AP02538 564 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 KRT6BP04259 564 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 GM2AP17900 193 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SSTR1P30872 391 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 PIK3CBP42338 1070 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 TKTL1P51854 596 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 EVX2Q03828 476 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 PTK2BQ14289 1009 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 GRM2Q14416 872 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SNRNP35Q16560 246 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 CBWD6Q4V339 395 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CBWD3Q5JTY5 395 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CBWD5Q5RIA9 395 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 MZT2BQ6NZ67 158 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 POTEHQ6S545 545 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SLC47A2Q86VL8 602 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 APOBEC3FQ8IUX4 373 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 ARHGEF19Q8IW93 802 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 PCYOX1LQ8NBM8 494 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 OR4D6Q8NGJ1 314 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 RP9Q8TA86 221 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 SUN3Q8TAQ9 357 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CYGBQ8WWM9 190 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 AKAP1Q92667 903 aaKnown RBP eCLIP5.77□□□□□ -1.494e-9■■■■■ 32.4
RFC1-202ENST00000381897 TMA16Q96EY4 203 aaKnown RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 FAR2Q96K12 515 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 COLEC11Q9BWP8 271 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 RPAP3Q9H6T3 665 aaPredicted RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 JMJD4Q9H9V9 463 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 CCNB1IP1Q9NPC3 277 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 TOPORSQ9NS56 1045 aaPredicted RBP5.77□□□□□ -1.49
RFC1-202ENST00000381897 TBC1D22BQ9NU19 505 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SYBUQ9NX95 663 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 M0R3G1 203 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 PIP5K1CO60331 668 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 BEST1O76090 585 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 GSNP06396 782 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 RALBP11234 206 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 ZNF23P17027 643 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 SLC16A2P36021 539 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 GCNT1Q02742 428 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 GRIN2CQ14957 1233 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 QRICH1Q2TAL8 776 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 ZNF618Q5T7W0 954 aa5.77□□□□□ -1.49
RFC1-202ENST00000381897 TMEM270Q6UE05 265 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms