RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 BUB1O43683 1085 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 SIGLEC6O43699 453 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 SDC3O75056 442 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 CD160O95971 181 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 IGSF6O95976 241 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 PAK4O96013 591 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-202ENST00000381208 GRM3Q14832 879 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 RTP5Q14D33 572 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 MYLK3Q32MK0 819 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 FAM72AQ5TYM5 149 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 SEL1L3Q68CR1 1132 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 FAM72DQ6L9T8 149 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 DCUN1D2Q6PH85 259 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 PHLDB2Q86SQ0 1253 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 FAM72BQ86X60 149 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 ZNF354CQ86Y25 554 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 SLC25A45Q8N413 288 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 CCDC185Q8N715 623 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 MYOCQ99972 504 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 C1QTNF2Q9BXJ5 285 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 FZD3Q9NPG1 666 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 GPR27Q9NS67 375 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 NDFIP2Q9NV92 336 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 DKK3Q9UBP4 350 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 IPO11Q9UI26 975 aaKnown RBP13.19□□□□□ -0.3
RPAIN-202ENST00000381208 NEU3Q9UQ49 428 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 CLCA2Q9UQC9 943 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 CA5BQ9Y2D0 317 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 MFHAS1Q9Y4C4 1052 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 CSNK1G3Q9Y6M4 447 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 FAM170AA1A519 330 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 KRIT1O00522 736 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 SCAMP1O15126 338 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 CSF2P04141 144 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 GP1BAP07359 652 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 CKMT1AP12532 417 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 PTK2BQ14289 1009 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 ACAD10Q6JQN1 1059 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 SCYL2Q6P3W7 929 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 PARGQ86W56 976 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 FAM181AQ8N9Y4 354 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 HCAR2Q8TDS4 363 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 BTN2A2Q8WVV5 523 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 BMFQ96LC9 184 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 MCEEQ96PE7 176 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 NCAPGQ9BPX3 1015 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 TTYH3Q9C0H2 523 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 DNAJC28Q9NX36 388 aa13.18□□□□□ -0.3
RPAIN-202ENST00000381208 TP53BP1Q12888 1972 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-202ENST00000381208 LAMA5O15230 3695 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 SPTY2D1-AS1A0A0U1RR47 76 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 TCRBV5S1A1TA0A578 114 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 SMTNL1A8MU46 457 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 TRIM38O00635 465 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 CCP110O43303 1012 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 TMCC1O94876 653 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 GJB6O95452 261 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 UGT2B4P06133 528 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 NME1P15531 152 aaKnown RBP13.17□□□□□ -0.3
RPAIN-202ENST00000381208 ZNF135P52742 658 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-202ENST00000381208 CLDN2P57739 230 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 RHOAP61586 193 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 TARDBPQ13148 414 aaKnown RBP eCLIP13.17□□□□□ -0.3
RPAIN-202ENST00000381208 NCAPHQ15003 741 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 FILIP1LQ4L180 1135 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 RAB6CQ53S08 254 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 GDPD4Q6W3E5 623 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 TTC7BQ86TV6 843 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 MCOLN2Q8IZK6 566 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 SLC22A18ASQ8N1D0 253 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 UMODL1-AS1Q8N2C9 162 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 DCBLD1Q8N8Z6 715 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 BAP1Q92560 729 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 TBATAQ96M53 351 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 BPIFA3Q9BQP9 254 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 CPEB1Q9BZB8 566 aaKnown RBP13.17□□□□□ -0.3
RPAIN-202ENST00000381208 RAB6CQ9H0N0 254 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 PARVAQ9NVD7 372 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 FZD10Q9ULW2 581 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 AK5Q9Y6K8 562 aa13.17□□□□□ -0.3
RPAIN-202ENST00000381208 ASXL3Q9C0F0 2248 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 POM121BA6NF01 834 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 IGLON5A6NGN9 336 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 RASA4BC9J798 803 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 RNF103O00237 685 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 TPP1O14773 563 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 AREL1O15033 823 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 RASA4O43374 803 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 CREB3O43889 395 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 TM7SF2O76062 418 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 TNFAIP3P21580 790 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 XPAP23025 273 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-202ENST00000381208 ABL2P42684 1182 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 NDST2P52849 883 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 YPEL5P62699 121 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 ELP6Q0PNE2 266 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 SERINC3Q13530 473 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 FGL2Q14314 439 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 FZD2Q14332 565 aa13.16□□□□□ -0.3
RPAIN-202ENST00000381208 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms