RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 KMT2EQ8IZD2 1858 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 LAMA1P25391 3075 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 C5orf60A6NFR6 353 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 ZNF500O60304 480 aaPredicted RBP12.82□□□□□ -0.36
SMN1-202ENST00000380707 ALDH1A2O94788 518 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 PIGNO95427 931 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 MMP2P08253 660 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
SMN1-202ENST00000380707 PAFAH1B1P43034 410 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 PSMD8P48556 350 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 CSTF1Q05048 431 aaKnown RBP12.82□□□□□ -0.36
SMN1-202ENST00000380707 CST6Q15828 149 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 ANKRD20A2Q5SQ80 823 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 ANKRD20A1Q5TYW2 823 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 ANKRD20A3Q5VUR7 823 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 ZNF776Q68DI1 518 aaPredicted RBP12.82□□□□□ -0.36
SMN1-202ENST00000380707 NCEH1Q6PIU2 408 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 PID1Q7Z2X4 250 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 DSG4Q86SJ6 1040 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 RASSF3Q86WH2 238 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 CAMK1DQ8IU85 385 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 PGBD3Q8N328 593 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 KIF18AQ8NI77 898 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 PIP4K2CQ8TBX8 421 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 CCDC110Q8TBZ0 833 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 RTP4Q96DX8 246 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 SIPA1Q96FS4 1042 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 CPEB1Q9BZB8 566 aaKnown RBP12.82□□□□□ -0.36
SMN1-202ENST00000380707 GLOD4Q9HC38 313 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 SCUBE2Q9NQ36 999 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 BCCIPQ9P287 314 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMN1-202ENST00000380707 EBF1Q9UH73 591 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 TRHDEQ9UKU6 1024 aa12.82□□□□□ -0.36
SMN1-202ENST00000380707 ZNF318Q5VUA4 2279 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 GOLGA6L10A0A0M3HER8 536 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 CFAP69A5D8W1 941 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 F5H423 210 aaPredicted RBP12.81□□□□□ -0.36
SMN1-202ENST00000380707 MID1O15344 667 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 PHF2O75151 1096 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 GCATO75600 419 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 STK10O94804 968 aaKnown RBP12.81□□□□□ -0.36
SMN1-202ENST00000380707 IFNB1P01574 187 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 PRNPP04156 253 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 UGT2B4P06133 528 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 ETS1P14921 441 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 NFKB1P19838 968 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 CES1P23141 567 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 HOXA6P31267 233 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 SLC8A1P32418 973 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 COILP38432 576 aaPredicted RBP12.81□□□□□ -0.36
SMN1-202ENST00000380707 CD86P42081 329 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 AP1S1P61966 158 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 RAD51Q06609 339 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 CCDC137Q6PK04 289 aaKnown RBP12.81□□□□□ -0.36
SMN1-202ENST00000380707 KIAA1324Q6UXG2 1013 aaKnown RBP12.81□□□□□ -0.36
SMN1-202ENST00000380707 GDPD4Q6W3E5 623 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 PRUNE1Q86TP1 453 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 AADATQ8N5Z0 425 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 GLIS1Q8NBF1 620 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 SPATA22Q8NHS9 363 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 PRCCQ92733 491 aaPredicted RBP12.81□□□□□ -0.36
SMN1-202ENST00000380707 IMP4Q96G21 291 aaKnown RBP12.81□□□□□ -0.36
SMN1-202ENST00000380707 LRIG1Q96JA1 1093 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 SPATA13Q96N96 652 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 TPSD1Q9BZJ3 242 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 SLC25A51Q9H1U9 297 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 CD93Q9NPY3 652 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 HAUS2Q9NVX0 235 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 CDC23Q9UJX2 597 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 PCDHGC4Q9Y5F7 938 aa12.81□□□□□ -0.36
SMN1-202ENST00000380707 PLK4O00444 970 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 KPNA3O00505 521 aaPredicted RBP12.8□□□□□ -0.36
SMN1-202ENST00000380707 TRAFD1O14545 582 aaPredicted RBP12.8□□□□□ -0.36
SMN1-202ENST00000380707 OPHN1O60890 802 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 ZNF189O75820 626 aaPredicted RBP12.8□□□□□ -0.36
SMN1-202ENST00000380707 ADH1BP00325 375 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 DNTTP04053 509 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 MAPK8P45983 427 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 ZBTB16Q05516 673 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 ANGPT1Q15389 498 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 RALGPS1Q5JS13 557 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 FAM46CQ5VWP2 391 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 PRPF39Q86UA1 669 aaKnown RBP12.8□□□□□ -0.36
SMN1-202ENST00000380707 ATL2Q8NHH9 583 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 ARRDC3Q96B67 414 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 KLHL32Q96NJ5 620 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 TUBGCP5Q96RT8 1024 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 RBM15Q96T37 977 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMN1-202ENST00000380707 GORASP1Q9BQQ3 440 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 OSBPL1AQ9BXW6 950 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 DDX47Q9H0S4 455 aaKnown RBP12.8□□□□□ -0.36
SMN1-202ENST00000380707 PABPC3Q9H361 631 aaKnown RBP12.8□□□□□ -0.36
SMN1-202ENST00000380707 ATP13A3Q9H7F0 1226 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 SERGEFQ9UGK8 458 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 FBXO4Q9UKT5 387 aa12.8□□□□□ -0.36
SMN1-202ENST00000380707 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.79□□□□□ -0.36
SMN1-202ENST00000380707 C1QTNF3-AMACRE9PGA6 284 aa12.79□□□□□ -0.36
SMN1-202ENST00000380707 GALR2O43603 387 aaPredicted RBP12.79□□□□□ -0.36
SMN1-202ENST00000380707 MT-CYBP00156 380 aaPredicted RBP12.79□□□□□ -0.36
SMN1-202ENST00000380707 SERPINF2P08697 491 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms