RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ANKRD20A4Q4UJ75 823 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 ZNF789Q5FWF6 425 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 GPR158Q5T848 1215 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 PACS1Q6VY07 963 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 SPATA24Q86W54 205 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 PCDH20Q8N6Y1 951 aaKnown RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 LMNTD1Q8N9Z9 388 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 NMUR2Q9GZQ4 415 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 GRID1Q9ULK0 1009 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 SMG5Q9UPR3 1016 aaKnown RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 ACOT9Q9Y305 439 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 PKP3Q9Y446 797 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 TIMM22Q9Y584 194 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 WNT6Q9Y6F9 365 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 C1orf232A0A0U1RR37 186 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 FCHO1O14526 889 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 PARNO95453 639 aaKnown RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 FYNP06241 537 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 WARSP23381 471 aaKnown RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 MZF1P28698 734 aaPredicted RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 HNF4AP41235 474 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 RENBPP51606 427 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 CCDC85BQ15834 202 aaPredicted RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 PTPRNQ16849 979 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 PARP6Q2NL67 630 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 FSTL4Q6MZW2 842 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 KLC3Q6P597 504 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 CYP2R1Q6VVX0 501 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 STRADAQ7RTN6 431 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 ADCK2Q7Z695 626 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 NPAS4Q8IUM7 802 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 GALNT4Q8N4A0 578 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 TDRD5Q8NAT2 981 aaKnown RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 ULK4Q96C45 1275 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 NPY6RQ99463 290 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 OSBPL1AQ9BXW6 950 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 OSGEPL1Q9H4B0 414 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 UBA2Q9UBT2 640 aaPredicted RBP8.2□□□□□ -1.1
CKAP2-203ENST00000378037 AURKCQ9UQB9 309 aa8.2□□□□□ -1.1
CKAP2-203ENST00000378037 ALPK2Q86TB3 2170 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 BTN3A1O00481 513 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 ANXA9O76027 345 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 SKIP12755 728 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 EN2P19622 333 aaPredicted RBP8.19□□□□□ -1.1
CKAP2-203ENST00000378037 FDFT1P37268 417 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 GP5P40197 560 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 BIRC2Q13490 618 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 ARHGEF7Q14155 803 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 LBRQ14739 615 aaKnown RBP8.19□□□□□ -1.1
CKAP2-203ENST00000378037 DPYSL2Q16555 572 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 GET4Q7L5D6 327 aaPredicted RBP8.19□□□□□ -1.1
CKAP2-203ENST00000378037 MREGQ8N565 214 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 RELTQ969Z4 430 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 FCRL3Q96P31 734 aaPredicted RBP8.19□□□□□ -1.1
CKAP2-203ENST00000378037 TLE6Q9H808 572 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 DNMT3LQ9UJW3 386 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 FBXO5Q9UKT4 447 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 DRG1Q9Y295 367 aaKnown RBP8.19□□□□□ -1.1
CKAP2-203ENST00000378037 PPME1Q9Y570 386 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 USH1CQ9Y6N9 552 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 CACNA1HO95180 2353 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 SVILO95425 2214 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 MICAL3Q7RTP6 2002 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 DNAJC13O75165 2243 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 LRRC14BA6NHZ5 514 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 PLK4O00444 970 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 STAMBPO95630 424 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 MT-ND1P03886 318 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 CYBBP04839 570 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 BMP1P13497 986 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 HNRNPH1P31943 449 aaKnown RBP8.19□□□□□ -1.1
CKAP2-203ENST00000378037 DRG2P55039 364 aaKnown RBP8.19□□□□□ -1.1
CKAP2-203ENST00000378037 CORO7P57737 925 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 NRG1Q02297 640 aaPredicted RBP8.19□□□□□ -1.1
CKAP2-203ENST00000378037 TSNAXIP1Q2TAA8 658 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 PITRM1Q5JRX3 1037 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 PPM1LQ5SGD2 360 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 ANKS3Q6ZW76 656 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 SCD5Q86SK9 330 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 ZDHHC17Q8IUH5 632 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 FIBCD1Q8N539 461 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 BADQ92934 168 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 TUBGCP3Q96CW5 907 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 C1orf50Q9BV19 199 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 MTMR10Q9NXD2 777 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 CXXC1Q9P0U4 656 aaPredicted RBP8.19□□□□□ -1.1
CKAP2-203ENST00000378037 MRPS23Q9Y3D9 190 aaKnown RBP8.19□□□□□ -1.1
CKAP2-203ENST00000378037 PTPRFP10586 1907 aa8.19□□□□□ -1.1
CKAP2-203ENST00000378037 RTTNQ86VV8 2226 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 OR2AG2A6NM03 316 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 FFAR2O15552 330 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 BAIAP3O94812 1187 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 STATHP02808 62 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 KRT16P08779 473 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 HLA-EP13747 358 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 TFEBP19484 476 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 TACR2P21452 398 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 SLC1A6P48664 564 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 GLUD2P49448 558 aa8.18□□□□□ -1.1
CKAP2-203ENST00000378037 TAS2R39P59534 338 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms