RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PSMD8P48556 350 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 TAF13Q15543 124 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 BRMS1LQ5PSV4 323 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 PARGQ86W56 976 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 RNF145Q96MT1 663 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 TRIT1Q9H3H1 467 aaKnown RBP13.74□□□□□ -0.21
GPC6-201ENST00000377047 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.74□□□□□ -0.21
GPC6-201ENST00000377047 LINC00854A0A1B0GVQ3 168 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 FCHO1O14526 889 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 ACADSP16219 412 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 SMPD1P17405 629 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 RPL22P35268 128 aaKnown RBP13.74□□□□□ -0.21
GPC6-201ENST00000377047 PRKCZQ05513 592 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 BIKQ13323 160 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 CEP78Q5JTW2 689 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 RNF44Q7L0R7 432 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 C12orf50Q8NA57 414 aaPredicted RBP13.74□□□□□ -0.21
GPC6-201ENST00000377047 MYO19Q96H55 970 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 RXFP1Q9HBX9 757 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 ATAD3AQ9NVI7 634 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 URADA6NGE7 173 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 UBOX5O94941 541 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 CCNE2O96020 404 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 PAICSP22234 425 aaKnown RBP13.74□□□□□ -0.21
GPC6-201ENST00000377047 MC4RP32245 332 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 RNF148Q8N7C7 305 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 GPR156Q8NFN8 814 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 ARNTL2Q8WYA1 636 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 ING5Q8WYH8 240 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 ZNF75CPQ92670 426 aaPredicted RBP13.74□□□□□ -0.21
GPC6-201ENST00000377047 DEC1Q9P2X7 70 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 OR10H1Q9Y4A9 318 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 OPLAHO14841 1288 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 IFNGR2P38484 337 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 RXRGP48443 463 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 RPL14P50914 215 aaKnown RBP13.74□□□□□ -0.21
GPC6-201ENST00000377047 MPPE1Q53F39 396 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 SHC3Q92529 594 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 SLC39A8Q9C0K1 460 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 GULP1Q9UBP9 304 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 ASF1AQ9Y294 204 aa13.74□□□□□ -0.21
GPC6-201ENST00000377047 LRRC14BA6NHZ5 514 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 H0Y858 1186 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 DCXO43602 365 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 BANF1O75531 89 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 HLA-DQA2P01906 255 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 CLK3P49761 638 aaKnown RBP13.73□□□□□ -0.21
GPC6-201ENST00000377047 EML3Q32P44 896 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 KRT73Q86Y46 540 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 FAM20CQ8IXL6 584 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 UGT2B28Q9BY64 529 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 PTPRJQ12913 1337 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 PPP1R11O60927 126 aaPredicted RBP13.73□□□□□ -0.21
GPC6-201ENST00000377047 HNRNPCP07910 306 aaKnown RBP eCLIP13.73□□□□□ -0.213e-7■■□□□ 12.3
GPC6-201ENST00000377047 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.73□□□□□ -0.21
GPC6-201ENST00000377047 OLFML2BQ68BL8 750 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 CYP2R1Q6VVX0 501 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 TSHZ1Q6ZSZ6 1077 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 BNIPLQ7Z465 357 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 TCF25Q9BQ70 676 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 PCDH12Q9NPG4 1184 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 L1RE1Q9UN81 338 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 PCDHA2Q9Y5H9 948 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 PEX1O43933 1283 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 NTRK1P04629 796 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 CLCNKBP51801 687 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 CDK18Q07002 472 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 FRG1Q14331 258 aaKnown RBP13.73□□□□□ -0.21
GPC6-201ENST00000377047 RASAL3Q86YV0 1011 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 MSL3Q8N5Y2 521 aaKnown RBP13.73□□□□□ -0.21
GPC6-201ENST00000377047 WDR36Q8NI36 951 aaKnown RBP13.73□□□□□ -0.21
GPC6-201ENST00000377047 MARK4Q96L34 752 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 BDH2Q9BUT1 245 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 B3GNT5Q9BYG0 378 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 GDF3Q9NR23 364 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 ZNF232Q9UNY5 417 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 ADRA1DP25100 572 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 CSNK2BP67870 215 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 ZNF844Q08AG5 666 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 FAM187BQ17R55 369 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 SLC25A52Q3SY17 297 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 TBC1D14Q9P2M4 693 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 RWDD3Q9Y3V2 267 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 ADGRA3Q8IWK6 1321 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 TFEBP19484 476 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 PEX6Q13608 980 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 CYB5D1Q6P9G0 228 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 SIKE1Q9BRV8 207 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 TMEM79Q9BSE2 394 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 RIBC2Q9H4K1 309 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 FANCEQ9HB96 536 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 VPS45Q9NRW7 570 aa13.73□□□□□ -0.21
GPC6-201ENST00000377047 ZMYND8Q9ULU4 1186 aaPredicted RBP13.73□□□□□ -0.21
GPC6-201ENST00000377047 TSPAN1O60635 241 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 HIST1H2ABP04908 130 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 ALADP13716 330 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 CES1P23141 567 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 POLD2P49005 469 aa13.72□□□□□ -0.21
GPC6-201ENST00000377047 C16orf72Q14CZ0 275 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms