RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CNTN4Q8IWV2 1026 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 HEXDCQ8WVB3 486 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 PGAP3Q96FM1 320 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-202ENST00000376839 ELMO2Q96JJ3 720 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 TBL1YQ9BQ87 522 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 FICDQ9BVA6 458 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 MRPL46Q9H2W6 279 aaKnown RBP13.37□□□□□ -0.27
ACTN1-202ENST00000376839 CYP4F12Q9HCS2 524 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 ADARB2Q9NS39 739 aaKnown RBP13.37□□□□□ -0.27
ACTN1-202ENST00000376839 PCDHGA7Q9Y5G6 932 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 TLL2Q9Y6L7 1015 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 PLXNB2O15031 1838 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 MYLKQ15746 1914 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 E7ENX8 843 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 ZNF189O75820 626 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-202ENST00000376839 CAPNS1P04632 268 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 COL6A2P12110 1019 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 KCNA5P22460 613 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 RWDD4Q6NW29 188 aaKnown RBP13.37□□□□□ -0.27
ACTN1-202ENST00000376839 TRIM67Q6ZTA4 783 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 KDELC2Q7Z4H8 507 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 TAC4Q86UU9 113 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 PELI3Q8N2H9 469 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 PNPLA1Q8N8W4 532 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 B4GALNT2Q8NHY0 566 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 ZFP28Q8NHY6 868 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 STON2Q8WXE9 905 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 EZH1Q92800 747 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-202ENST00000376839 MRPS26Q9BYN8 205 aaKnown RBP13.37□□□□□ -0.27
ACTN1-202ENST00000376839 SEMA6AQ9H2E6 1030 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 CNGB3Q9NQW8 809 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 PTTG2Q9NZH5 202 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 BCAP29Q9UHQ4 241 aa13.37□□□□□ -0.27
ACTN1-202ENST00000376839 TRIM38O00635 465 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 CACNG3O60359 315 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 CXCR3P49682 368 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 PSME3P61289 254 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 SULT2A1Q06520 285 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 RALGDSQ12967 914 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 NRF1Q16656 503 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 PPP1R3AQ16821 1122 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 RAB41Q5JT25 222 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 LINC00523Q86TU6 105 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 HIC2Q96JB3 615 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 SENP8Q96LD8 212 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 SLC2A11Q9BYW1 496 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 ATXN3LQ9H3M9 355 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 SMIM35A0A1B0GVV1 85 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 C7orf72A4D263 438 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 HHLA1C9JL84 531 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 NPHS1O60500 1241 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 TRPA1O75762 1119 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 CSPG5O95196 566 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 ASLP04424 464 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 FAM58BPP0C7Q3 252 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 HSPA1AP0DMV8 641 aaKnown RBP13.36□□□□□ -0.27
ACTN1-202ENST00000376839 HSPA1BP0DMV9 641 aaKnown RBP13.36□□□□□ -0.27
ACTN1-202ENST00000376839 ZNF26P17031 533 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-202ENST00000376839 FGFR3P22607 806 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 AXLP30530 894 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 CHRNA4P43681 627 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 AFF1P51825 1210 aaKnown RBP13.36□□□□□ -0.27
ACTN1-202ENST00000376839 APOFQ13790 326 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 MAP7Q14244 749 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 UGP2Q16851 508 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 MGAT5BQ3V5L5 792 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 RBM20Q5T481 1227 aaKnown RBP13.36□□□□□ -0.27
ACTN1-202ENST00000376839 ZNF470Q6ECI4 717 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 PM20D1Q6GTS8 502 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 AMIGO2Q86SJ2 522 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 LCA5Q86VQ0 697 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 CEP70Q8NHQ1 597 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 SENP6Q9GZR1 1112 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-202ENST00000376839 TRPC7Q9HCX4 862 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 CHST12Q9NRB3 414 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 NCKIPSDQ9NZQ3 722 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 NEU3Q9UQ49 428 aa13.36□□□□□ -0.27
ACTN1-202ENST00000376839 MBLAC1A4D2B0 266 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-202ENST00000376839 LRPAP1P30533 357 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 PLK1P53350 603 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 C1QTNF8P60827 252 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 PDAP1Q13442 181 aaKnown RBP13.35□□□□□ -0.27
ACTN1-202ENST00000376839 CSHL1Q14406 222 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 RNF135Q8IUD6 432 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 ARHGAP12Q8IWW6 846 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 KLHDC8BQ8IXV7 354 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 LENG1Q96BZ8 264 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-202ENST00000376839 ZFRQ96KR1 1074 aaKnown RBP13.35□□□□□ -0.27
ACTN1-202ENST00000376839 SIK2Q9H0K1 926 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 TRIP12Q14669 1992 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-202ENST00000376839 TRPC5OSA6NMA1 111 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 FBP2O00757 339 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 DYNC1LI2O43237 492 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-202ENST00000376839 TREHO43280 583 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 PABPC1LQ4VXU2 614 aaKnown RBP13.35□□□□□ -0.27
ACTN1-202ENST00000376839 ZNF789Q5FWF6 425 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 NOMO2Q5JPE7 1267 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 B3GNT6Q6ZMB0 384 aa13.35□□□□□ -0.27
ACTN1-202ENST00000376839 PIWIL4Q7Z3Z4 852 aaKnown RBP13.35□□□□□ -0.27
ACTN1-202ENST00000376839 SPPL2BQ8TCT7 592 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms