RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 DIAPH2O60879 1101 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 VNN2O95498 520 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 IGLV3-27P01718 113 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 POLD2P49005 469 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 RAB10P61026 200 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 ANKS3Q6ZW76 656 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 ZNF781Q8N8C0 355 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 GPATCH11Q8N954 259 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 TTC8Q8TAM2 541 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 TACO1Q9BSH4 297 aaKnown RBP20.44■□□□□ 0.86
VSX1-202ENST00000376709 MRPL9Q9BYD2 267 aaKnown RBP20.44■□□□□ 0.86
VSX1-202ENST00000376709 MMADHCQ9H3L0 296 aaPredicted RBP20.44■□□□□ 0.86
VSX1-202ENST00000376709 ARNT2Q9HBZ2 717 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 HOXA2O43364 376 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 GALTP07902 379 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 RPSAP08865 295 aaKnown RBP20.44■□□□□ 0.86
VSX1-202ENST00000376709 ALOX15P16050 662 aaPredicted RBP20.44■□□□□ 0.86
VSX1-202ENST00000376709 ETFBP38117 255 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 CD151P48509 253 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 MXRA7P84157 204 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 RING1Q06587 406 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 ZNF460Q14592 562 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 PARP15Q460N3 678 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 VWA5B1Q5TIE3 1220 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 NEPROQ6NW34 567 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 C2CD4AQ8NCU7 369 aaPredicted RBP20.44■□□□□ 0.86
VSX1-202ENST00000376709 ELMO2Q96JJ3 720 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 TTPALQ9BTX7 342 aa20.44■□□□□ 0.86
VSX1-202ENST00000376709 SIN3BO75182 1162 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 COL6A2P12110 1019 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 AOC1P19801 751 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 PGM1P36871 562 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 SLC12A2P55011 1212 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 USP4Q13107 963 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 ACBD5Q5T8D3 534 aaPredicted RBP20.43■□□□□ 0.86
VSX1-202ENST00000376709 PRSS55Q6UWB4 352 aaPredicted RBP20.43■□□□□ 0.86
VSX1-202ENST00000376709 ZYG11AQ6WRX3 759 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 TAS1R1Q7RTX1 841 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 CEP97Q8IW35 865 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 CENPLQ8N0S6 344 aaPredicted RBP20.43■□□□□ 0.86
VSX1-202ENST00000376709 CRIPAKQ8N1N5 446 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 RBM15BQ8NDT2 890 aaKnown RBP20.43■□□□□ 0.86
VSX1-202ENST00000376709 AGR3Q8TD06 166 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 BCL7CQ8WUZ0 217 aaPredicted RBP20.43■□□□□ 0.86
VSX1-202ENST00000376709 PPP1R12CQ9BZL4 782 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 HIPK3Q9H422 1215 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 SAGE1Q9NXZ1 904 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 FBXO5Q9UKT4 447 aa20.43■□□□□ 0.86
VSX1-202ENST00000376709 TTC24A2A3L6 582 aaPredicted RBP20.42■□□□□ 0.86
VSX1-202ENST00000376709 DRGXA6NNA5 263 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 H0Y3Z8 333 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 TBC1D4O60343 1298 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 KLHL2O95198 593 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 RABGAP1LQ5R372 815 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 SNX30Q5VWJ9 437 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 LIPMQ5VYY2 423 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 MFSD6LQ8IWD5 586 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 FSTL5Q8N475 847 aaPredicted RBP20.42■□□□□ 0.86
VSX1-202ENST00000376709 TEX26Q8N6G2 289 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 FBXO27Q8NI29 283 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 GABPB2Q8TAK5 448 aaPredicted RBP20.42■□□□□ 0.86
VSX1-202ENST00000376709 KCNV2Q8TDN2 545 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 C2orf15Q8WU43 125 aaKnown RBP20.42■□□□□ 0.86
VSX1-202ENST00000376709 GATA5Q9BWX5 397 aaPredicted RBP20.42■□□□□ 0.86
VSX1-202ENST00000376709 CDH19Q9H159 772 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 ATP13A1Q9HD20 1204 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 COMMD8Q9NX08 183 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 UXTQ9UBK9 157 aaPredicted RBP20.42■□□□□ 0.86
VSX1-202ENST00000376709 ZNF195O14628 629 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 MMP2P08253 660 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 MYL4P12829 197 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 CRABP2P29373 138 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 NUMBP49757 651 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 KPNA1P52294 538 aaPredicted RBP20.42■□□□□ 0.86
VSX1-202ENST00000376709 IL10RBQ08334 325 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 SERINC3Q13530 473 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 LRRC8EQ6NSJ5 796 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 DEFB128Q7Z7B8 93 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 TDRD5Q8NAT2 981 aaKnown RBP20.42■□□□□ 0.86
VSX1-202ENST00000376709 CALML6Q8TD86 181 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 RNF208Q9H0X6 261 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 COG4Q9H9E3 785 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 ZNF212Q9UDV6 495 aa20.42■□□□□ 0.86
VSX1-202ENST00000376709 SLC38A8A6NNN8 435 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 LMNAP02545 664 aaKnown RBP20.41■□□□□ 0.86
VSX1-202ENST00000376709 ATF6P18850 670 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 LBRQ14739 615 aaKnown RBP20.41■□□□□ 0.86
VSX1-202ENST00000376709 TSTD2Q5T7W7 516 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 TMEM151AQ8N4L1 468 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 RANBP9Q96S59 729 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 TMEM175Q9BSA9 504 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 NACA2Q9H009 215 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 ILKAPQ9H0C8 392 aaPredicted RBP20.41■□□□□ 0.86
VSX1-202ENST00000376709 DCLRE1BQ9H816 532 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 XPR1Q9UBH6 696 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 OGDHLQ9ULD0 1010 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 F5H5T6 163 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 ZDHHC11BP0C7U3 371 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 CCL5P13501 91 aa20.41■□□□□ 0.86
VSX1-202ENST00000376709 NCF2P19878 526 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms