RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 FDXACB1Q9BRP7 624 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-201ENST00000376656 NAA50Q9GZZ1 169 aaKnown RBP16.68■□□□□ 0.26
TRIM39-201ENST00000376656 SETD4Q9NVD3 440 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 TLL2Q9Y6L7 1015 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 MRASO14807 208 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 ARF4P18085 180 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-201ENST00000376656 CYP2B6P20813 491 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 SLC7A2P52569 658 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 C1QTNF8P60827 252 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 IGBP1P78318 339 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 PAFAH1B3Q15102 231 aaKnown RBP16.68■□□□□ 0.26
TRIM39-201ENST00000376656 FGD3Q5JSP0 725 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 OTUD1Q5VV17 481 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-201ENST00000376656 OGFOD2Q6N063 350 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 ERMP1Q7Z2K6 904 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 EPHX4Q8IUS5 362 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 MFSD6LQ8IWD5 586 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRIM39-201ENST00000376656 RSPH1Q8WYR4 309 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 FAM149B1Q96BN6 582 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 MUC3BQ9H195 1237 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 TMEM181Q9P2C4 612 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 ACOT9Q9Y305 439 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 ZNF701M0R085 212 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-201ENST00000376656 STAU1O95793 577 aaKnown RBP16.68■□□□□ 0.26
TRIM39-201ENST00000376656 AARS2Q5JTZ9 985 aaKnown RBP16.68■□□□□ 0.26
TRIM39-201ENST00000376656 TMEM26Q6ZUK4 368 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 ZBTB46Q86UZ6 589 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 ADAMTS16Q8TE57 1224 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 BORCS5Q969J3 196 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 POMKQ9H5K3 350 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 AS3MTQ9HBK9 375 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 CROTQ9UKG9 612 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 UBDO15205 165 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 MYF6P23409 242 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 HADHAP40939 763 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 MATKP42679 507 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 MPP1Q00013 466 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 BST2Q10589 180 aaKnown RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 SQLEQ14534 574 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 RWDD4Q6NW29 188 aaKnown RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 NT5DC4Q86YG4 428 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 PLEKHA8Q96JA3 519 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 ADI1Q9BV57 179 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 FTHL17Q9BXU8 183 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 AURKCQ9UQB9 309 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 COQ6Q9Y2Z9 468 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 FAM72CH0Y354 149 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 DCLK1O15075 740 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 NPHS1O60500 1241 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 SERPINB7O75635 380 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 SNRPB2P08579 225 aaKnown RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 MAPRE2Q15555 327 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 ZNF829Q3KNS6 432 aaPredicted RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 DCAF6Q58WW2 860 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 SAMD4BQ5PRF9 694 aaKnown RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 FAM72AQ5TYM5 149 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 MEX3CQ5U5Q3 659 aaKnown RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 FAM72DQ6L9T8 149 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 DCDC5Q6ZRR9 648 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 NCCRP1Q6ZVX7 275 aaPredicted RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 FAM72BQ86X60 149 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 DENND6AQ8IWF6 608 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 RNF169Q8NCN4 708 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 OR2T34Q8NGX1 318 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 OR2T3Q8NH03 318 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 NCKIPSDQ9NZQ3 722 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 SELENONQ9NZV5 590 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 DOCK1Q14185 1865 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 FUOMA2VDF0 154 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 EEF2KO00418 725 aaKnown RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 XPOTO43592 962 aaKnown RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 SRP72O76094 671 aaKnown RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 ZBTB11O95625 1053 aaPredicted RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 MT-CO1P00395 513 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 NFKB1P19838 968 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 LRPAP1P30533 357 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 NME5P56597 212 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 ZBTB17Q13105 803 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 CTBP1Q13363 440 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 RAB39AQ14964 217 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 SLC25A52Q3SY17 297 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 C1QTNF12Q5T7M4 302 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 PRAMEF18Q5VWM3 479 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 C12orf42Q96LP6 360 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 CYP4F12Q9HCS2 524 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 RNF19AQ9NV58 838 aa16.67■□□□□ 0.26
TRIM39-201ENST00000376656 PTBP2Q9UKA9 531 aaKnown RBP16.67■□□□□ 0.26
TRIM39-201ENST00000376656 CITO14578 2027 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 TPST1O60507 370 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 FUCA1P04066 466 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 C21orf59P57076 290 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 BNIP3Q12983 259 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 ZNF280DQ6N043 979 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 NANOGP8Q6NSW7 305 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 EXOC8Q8IYI6 725 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 MFSD2AQ8NA29 543 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 FBXL20Q96IG2 436 aa16.66■□□□□ 0.26
TRIM39-201ENST00000376656 LRRC4Q9HBW1 653 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms