RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 DCAF12L1Q5VU92 463 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.13□□□□□ -0.47
CLIC1-207ENST00000375780 PRR23CQ6ZRP0 262 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 BBS5Q8N3I7 341 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 C12orf50Q8NA57 414 aaPredicted RBP12.13□□□□□ -0.47
CLIC1-207ENST00000375780 OR14C36Q8NHC7 312 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 CEP76Q8TAP6 659 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 CINPQ9BW66 212 aaPredicted RBP12.13□□□□□ -0.47
CLIC1-207ENST00000375780 MAK16Q9BXY0 300 aaKnown RBP12.13□□□□□ -0.47
CLIC1-207ENST00000375780 HDAC8Q9BY41 377 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 GOLPH3Q9H4A6 298 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 PARD6AQ9NPB6 346 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 LHX3Q9UBR4 397 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 SEPT3Q9UH03 358 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 EVLQ9UI08 416 aaPredicted RBP12.13□□□□□ -0.47
CLIC1-207ENST00000375780 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.13□□□□□ -0.47
CLIC1-207ENST00000375780 HYOU1Q9Y4L1 999 aa12.13□□□□□ -0.47
CLIC1-207ENST00000375780 CFAP54Q96N23 3096 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 DOCK9Q9BZ29 2069 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 KRIT1O00522 736 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 PLRG1O43660 514 aaKnown RBP12.12□□□□□ -0.47
CLIC1-207ENST00000375780 MAPK8P45983 427 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 NEK3P51956 506 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 METAP1P53582 386 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 GALNT2Q10471 571 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 CYTH1Q15438 398 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 DUOXA1Q1HG43 343 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 POM121L1PQ3SYA9 428 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 ATXN7L2Q5T6C5 722 aaPredicted RBP12.12□□□□□ -0.47
CLIC1-207ENST00000375780 KIAA0895LQ68EN5 471 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 NCEH1Q6PIU2 408 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 ARHGAP36Q6ZRI8 547 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 ERN2Q76MJ5 926 aaKnown RBP12.12□□□□□ -0.47
CLIC1-207ENST00000375780 TP53INP2Q8IXH6 220 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 KATNAL2Q8IYT4 538 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 PQLC3Q8N755 202 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 LRRC57Q8N9N7 239 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 ARRDC3Q96B67 414 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 RBM41Q96IZ5 413 aaKnown RBP12.12□□□□□ -0.47
CLIC1-207ENST00000375780 PSKH2Q96QS6 385 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 CPEB1Q9BZB8 566 aaKnown RBP12.12□□□□□ -0.47
CLIC1-207ENST00000375780 C6orf106Q9H6K1 298 aaPredicted RBP12.12□□□□□ -0.47
CLIC1-207ENST00000375780 PREBQ9HCU5 417 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 ARGLU1Q9NWB6 273 aaPredicted RBP12.12□□□□□ -0.47
CLIC1-207ENST00000375780 JRKLQ9Y4A0 524 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 PLXNA2O75051 1894 aa12.12□□□□□ -0.47
CLIC1-207ENST00000375780 TP53BP1Q12888 1972 aaPredicted RBP12.11□□□□□ -0.47
CLIC1-207ENST00000375780 ATXN2Q99700 1313 aaKnown RBP12.11□□□□□ -0.47
CLIC1-207ENST00000375780 FAM47DPA6NHR8 397 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 C3orf70A6NLC5 250 aaPredicted RBP12.11□□□□□ -0.47
CLIC1-207ENST00000375780 PRR5-ARHGAP8B1AHC4 643 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 APOL1O14791 398 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 KHNYNO15037 678 aaKnown RBP12.11□□□□□ -0.47
CLIC1-207ENST00000375780 MAFKO60675 156 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 FTCDO95954 541 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 NUDT1P36639 197 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 GARSP41250 739 aaKnown RBP12.11□□□□□ -0.47
CLIC1-207ENST00000375780 CSNK1DP48730 415 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 CCR5P51681 352 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 NSUN2Q08J23 767 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLIC1-207ENST00000375780 TFDP2Q14188 446 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 ZNF235Q14590 738 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 LBRQ14739 615 aaKnown RBP12.11□□□□□ -0.47
CLIC1-207ENST00000375780 ZNF805Q5CZA5 627 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 PIP5KL1Q5T9C9 394 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 PAPD7Q5XG87 772 aaKnown RBP12.11□□□□□ -0.47
CLIC1-207ENST00000375780 SLC9A4Q6AI14 798 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 TIGD7Q6NT04 549 aaPredicted RBP12.11□□□□□ -0.47
CLIC1-207ENST00000375780 NEK5Q6P3R8 708 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 KIAA2013Q8IYS2 634 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 SYCE1Q8N0S2 351 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 NETO2Q8NC67 525 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 KNL1Q8NG31 2342 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 OR6K2Q8NGY2 324 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 SNX19Q92543 992 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 FATE1Q969F0 183 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 RAB7BQ96AH8 199 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 TUBGCP5Q96RT8 1024 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 NUSAP1Q9BXS6 441 aaKnown RBP12.11□□□□□ -0.47
CLIC1-207ENST00000375780 HAUS2Q9NVX0 235 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 OGFRQ9NZT2 677 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 ADAMTS9Q9P2N4 1935 aa12.11□□□□□ -0.47
CLIC1-207ENST00000375780 TBC1D3DA0A087WVF3 549 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 TBC1D3IA0A087WXS9 549 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 TBC1D3EA0A087X179 549 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 TBC1D3KA0A087X1G2 549 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 A0A1B0GTW7 788 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 CCDC66A2RUB6 948 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 TBC1D3FA6NER0 549 aaPredicted RBP12.1□□□□□ -0.47
CLIC1-207ENST00000375780 TBC1D3LB9A6J9 549 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 FSBPO95073 299 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 ZRANB2O95218 330 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLIC1-207ENST00000375780 UGT2B4P06133 528 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 TBC1D3HP0C7X1 549 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 CD27P26842 260 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 CTNNA1P35221 906 aaKnown RBP12.1□□□□□ -0.47
CLIC1-207ENST00000375780 ARHGAP8P85298 464 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 CCDC6Q16204 474 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 TAZQ16635 292 aa12.1□□□□□ -0.47
CLIC1-207ENST00000375780 TRIM61Q5EBN2 209 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms