RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 EBF4Q9BQW3 602 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 MCMBPQ9BTE3 642 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 MAGEB3O15480 346 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 TIMM44O43615 452 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 PMPCBO75439 489 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 SOAT2O75908 522 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 SORBS2O94875 1100 aaKnown RBP14.15□□□□□ -0.14
MSH5-202ENST00000375740 C2P06681 752 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 RALBP11234 206 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 GEMP55040 296 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 ARPP19P56211 112 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 ACTR3P61158 418 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 NRG1Q02297 640 aaPredicted RBP14.15□□□□□ -0.14
MSH5-202ENST00000375740 CCDC153Q494R4 210 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 TIGD7Q6NT04 549 aaPredicted RBP14.15□□□□□ -0.14
MSH5-202ENST00000375740 MSANTD2Q6P1R3 559 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 DUS1LQ6P1R4 473 aaKnown RBP14.15□□□□□ -0.14
MSH5-202ENST00000375740 KDELC2Q7Z4H8 507 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 ULK2Q8IYT8 1036 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 PIWIL2Q8TC59 973 aaKnown RBP14.15□□□□□ -0.14
MSH5-202ENST00000375740 RAET1EQ8TD07 263 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 VPS39Q96JC1 886 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 RILPQ96NA2 401 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 NOL6Q9H6R4 1146 aaKnown RBP14.15□□□□□ -0.14
MSH5-202ENST00000375740 STARD7Q9NQZ5 370 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 PLA2G4CQ9UP65 541 aa14.15□□□□□ -0.14
MSH5-202ENST00000375740 TBX18O95935 607 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 HOXD10P28358 340 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 ADRA1AP35348 466 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 AQP4P55087 323 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 EFEMP1Q12805 493 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 NOGQ13253 232 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 GRM3Q14832 879 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 FAM91A1Q658Y4 838 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 LHX8Q68G74 356 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 PDPK2PQ6A1A2 396 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 WDR75Q8IWA0 830 aaKnown RBP14.14□□□□□ -0.15
MSH5-202ENST00000375740 SLC43A3Q8NBI5 491 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 SNRNP27Q8WVK2 155 aaKnown RBP14.14□□□□□ -0.15
MSH5-202ENST00000375740 GPR62Q9BZJ7 368 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 TMEM161AQ9NX61 479 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 IPO11Q9UI26 975 aaKnown RBP14.14□□□□□ -0.15
MSH5-202ENST00000375740 ZNF232Q9UNY5 417 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 SLC27A5Q9Y2P5 690 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 VWA8A3KMH1 1905 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 A0A0J9YVX5 310 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 WASH4PA8MWX3 477 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 F8W8V4 182 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 SYN3O14994 580 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 GRK2P25098 689 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 ARRB2P32121 409 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 ITGA9Q13797 1035 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 C1orf146Q5VVC0 180 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 ACAD11Q709F0 780 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 TFAP2DQ7Z6R9 452 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 CLEC14AQ86T13 490 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 OR6Y1Q8NGX8 325 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 ABTB1Q969K4 478 aaPredicted RBP14.14□□□□□ -0.15
MSH5-202ENST00000375740 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 SORT1Q99523 831 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 TSEN34Q9BSV6 310 aaKnown RBP14.14□□□□□ -0.15
MSH5-202ENST00000375740 ATXN3LQ9H3M9 355 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 PNPOQ9NVS9 261 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 SLC39A10Q9ULF5 831 aa14.14□□□□□ -0.15
MSH5-202ENST00000375740 CAPN14A8MX76 684 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 ENPP3O14638 875 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 MAGEC1O60732 1142 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 SLC2A3P11169 496 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 GATMP50440 423 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 ALDH18A1P54886 795 aaKnown RBP14.13□□□□□ -0.15
MSH5-202ENST00000375740 AP2B1P63010 937 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 MRPL58Q14197 206 aaKnown RBP14.13□□□□□ -0.15
MSH5-202ENST00000375740 MS4A13Q5J8X5 152 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 ESRP1Q6NXG1 681 aaKnown RBP14.13□□□□□ -0.15
MSH5-202ENST00000375740 LRRC8DQ7L1W4 858 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 PDSS2Q86YH6 399 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 TMPRSS6Q8IU80 811 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 ZNF683Q8IZ20 524 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 FTHL17Q9BXU8 183 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 PCDHGB4Q9UN71 923 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 PCDHGB5Q9Y5G0 923 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 PLXNA3P51805 1871 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 MEI4A8MW99 385 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 VILLO15195 856 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 CNTN5O94779 1100 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 VAPBO95292 243 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 AHSGP02765 367 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 SAT1P21673 171 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 YWHAQP27348 245 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 GABRB3P28472 473 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 MAGEA11P43364 429 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 PGGT1BP53609 377 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 ABCE1P61221 599 aaKnown RBP14.13□□□□□ -0.15
MSH5-202ENST00000375740 PSMD5Q16401 504 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 ZC3HC1Q86WB0 502 aaKnown RBP14.13□□□□□ -0.15
MSH5-202ENST00000375740 ABI1Q8IZP0 508 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 MRGPRX2Q96LB1 330 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 ENTPD7Q9NQZ7 604 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 IL37Q9NZH6 218 aa14.13□□□□□ -0.15
MSH5-202ENST00000375740 ADAMTS6Q9UKP5 1117 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms