RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 IRF1P10914 325 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 HLA-DPA1P20036 260 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ALDH3A1P30838 453 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SGSHP51688 502 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CCDC153Q494R4 210 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SIRPB2Q5JXA9 342 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TSTD2Q5T7W7 516 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 KIAA0408Q6ZU52 694 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 C16orf59Q7L2K0 433 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CMC1Q7Z7K0 106 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 LCA5Q86VQ0 697 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SLC25A41Q8N5S1 370 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 FITM2Q8N6M3 262 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 PSKH2Q96QS6 385 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TRIM55Q9BYV6 548 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 UBA2Q9UBT2 640 aaPredicted RBP18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SLC2A6Q9UGQ3 507 aa18.19■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CCDC78A2IDD5 438 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 MROH6A6NGR9 719 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GFRA2O00451 464 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TGM5O43548 720 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GREM1O60565 184 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SNNO75324 88 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 DCTN3O75935 186 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 UBOX5O94941 541 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 PRKCGP05129 697 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 FGF1P05230 155 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 DNAJB1P25685 340 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SMAD3P84022 425 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 OCRLQ01968 901 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 BST1Q10588 318 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 PPIGQ13427 754 aaKnown RBP eCLIP18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 LAMB3Q13751 1172 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SEPT6Q14141 434 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CNGA3Q16281 694 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 PPM1JQ5JR12 505 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 IL31Q6EBC2 164 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CXorf57Q6NSI4 855 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 LILRA6Q6PI73 481 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 Q6ZNB5 142 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 KDELC2Q7Z4H8 507 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 FAM217AQ8IXS0 508 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 C2CD4AQ8NCU7 369 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ADAMTS19Q8TE59 1207 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 PEX13Q92968 403 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 NPHS2Q9NP85 383 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ANKRD6Q9Y2G4 727 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GOLGA8TH3BQL2 631 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 DNAJC8O75937 253 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SERPINF2P08697 491 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GABRB3P28472 473 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TMPRSS15P98073 1019 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CDK18Q07002 472 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 BNIP1Q12981 228 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 THOC5Q13769 683 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GRM3Q14832 879 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CHI3L2Q15782 390 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 FASTKD1Q53R41 847 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SPDYAQ5MJ70 313 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GALNT7Q86SF2 657 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 C10orf67Q8IYJ2 551 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GABPB2Q8TAK5 448 aaPredicted RBP18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CALML6Q8TD86 181 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ATXN7L3BQ96GX2 97 aa18.18■□□□□ 0.5
HLA-DQB1-201ENST00000374943 A0A096LPK6 155 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ZBBXA8MT70 800 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 FGBP02675 491 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 AHSGP02765 367 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CES1P23141 567 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 PCLAFQ15004 111 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 MBLAC2Q68D91 279 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 C16orf46Q6P387 395 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CCDC149Q6ZUS6 474 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TMC8Q8IU68 726 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 HJURPQ8NCD3 748 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 IFT43Q96FT9 208 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 THOC1Q96FV9 657 aaKnown RBP18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SLC22A12Q96S37 553 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CINPQ9BW66 212 aaPredicted RBP18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 LRRC3Q9BY71 257 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TRPC7Q9HCX4 862 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SMPD4Q9NXE4 827 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TMEM216Q9P0N5 145 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 GGT7Q9UJ14 662 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 RIMKLBQ9ULI2 386 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 INSL6Q9Y581 213 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CAPN7Q9Y6W3 813 aa18.17■□□□□ 0.5
HLA-DQB1-201ENST00000374943 TTC24A2A3L6 582 aaPredicted RBP18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SLC7A4O43246 635 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 C2P06681 752 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ADH1AP07327 375 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CR2P20023 1033 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SLC1A2P43004 574 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 ACVR1Q04771 509 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 OVGP1Q12889 678 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 SETDB1Q15047 1291 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 CES4AQ5XG92 561 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 NEPROQ6NW34 567 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 LMNTD2Q8IXW0 634 aa18.16■□□□□ 0.5
HLA-DQB1-201ENST00000374943 KLHL23Q8NBE8 558 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms