RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 VTI1BQ9UEU0 232 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 AKT3Q9Y243 479 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 ZNF510Q9Y2H8 683 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 NME7Q9Y5B8 376 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 EVPLQ92817 2033 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 C17orf102A2RUQ5 167 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 SLC22A2O15244 555 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 CABYRO75952 493 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 DDHD2O94830 711 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 APOA4P06727 396 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 ARF4P18085 180 aaPredicted RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 RPL10P27635 214 aaKnown RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 CCND3P30281 292 aaPredicted RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 GLUD2P49448 558 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 NDST2P52849 883 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 NME3Q13232 169 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 ZNF460Q14592 562 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 ANO4Q32M45 955 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 DCAF6Q58WW2 860 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 TMEM135Q86UB9 458 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 PSTKQ8IV42 348 aaKnown RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 DEFB106AQ8N104 65 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 FSTL5Q8N475 847 aaPredicted RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 DCUN1D5Q9BTE7 237 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 C11orf84Q9BUA3 381 aaPredicted RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 PRDM16Q9HAZ2 1276 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 UBP1Q9NZI7 540 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 IGSF9Q9P2J2 1179 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 XPR1Q9UBH6 696 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 FZD10Q9ULW2 581 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 ZNF711Q9Y462 761 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 MYADML2A6NDP7 307 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 SLCO1B7G3V0H7 640 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 RPLP2P05387 115 aaKnown RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 ARSAP15289 507 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 HDCP19113 662 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 ADSLP30566 484 aaPredicted RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 HTRA3P83110 453 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 SULT2A1Q06520 285 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 NSUN2Q08J23 767 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 DPYSQ14117 519 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 TRIM25Q14258 630 aaKnown RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 C16orf72Q14CZ0 275 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 GNASQ5JWF2 1037 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 ITPRIPL1Q6GPH6 555 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 ZNF554Q86TJ5 538 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 HERC6Q8IVU3 1022 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 SNX31Q8N9S9 440 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 LPGAT1Q92604 370 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 GFM2Q969S9 779 aaKnown RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 ZNF597Q96LX8 424 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 NOL11Q9H8H0 719 aaKnown RBP11.22□□□□□ -0.61
CCDC40-203ENST00000374877 TRPC7Q9HCX4 862 aa11.22□□□□□ -0.61
CCDC40-203ENST00000374877 C9IYK1 514 aa11.21□□□□□ -0.61
CCDC40-203ENST00000374877 H3BNH8 94 aa11.21□□□□□ -0.61
CCDC40-203ENST00000374877 AP2A1O95782 977 aa11.21□□□□□ -0.61
CCDC40-203ENST00000374877 VTNP04004 478 aa11.21□□□□□ -0.61
CCDC40-203ENST00000374877 SBK3P0C264 359 aa11.21□□□□□ -0.61
CCDC40-203ENST00000374877 CKMT2P17540 419 aa11.21□□□□□ -0.61
CCDC40-203ENST00000374877 TXNL4AP83876 142 aaKnown RBP11.21□□□□□ -0.61
CCDC40-203ENST00000374877 RFTN1Q14699 578 aaPredicted RBP11.21□□□□□ -0.61
CCDC40-203ENST00000374877 CLVS1Q8IUQ0 354 aaPredicted RBP11.21□□□□□ -0.61
CCDC40-203ENST00000374877 LSMEM2Q8N112 164 aa11.21□□□□□ -0.61
CCDC40-203ENST00000374877 FAM47BQ8NA70 645 aa11.21□□□□□ -0.61
CCDC40-203ENST00000374877 PCSK9Q8NBP7 692 aaKnown RBP11.21□□□□□ -0.61
CCDC40-203ENST00000374877 IL22Q9GZX6 179 aa11.21□□□□□ -0.61
CCDC40-203ENST00000374877 PNPLA3Q9NST1 481 aa11.21□□□□□ -0.61
CCDC40-203ENST00000374877 CNOT11Q9UKZ1 510 aaKnown RBP11.21□□□□□ -0.61
CCDC40-203ENST00000374877 PLOD2O00469 737 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 PTPN3P26045 913 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 ENTPD1P49961 510 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 CSE1LP55060 971 aaKnown RBP11.21□□□□□ -0.62
CCDC40-203ENST00000374877 CCSAPQ6IQ19 270 aaPredicted RBP11.21□□□□□ -0.62
CCDC40-203ENST00000374877 ZBTB49Q6ZSB9 765 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 CARM1Q86X55 608 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 SLC41A1Q8IVJ1 513 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 RIN3Q8TB24 985 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 FNDC8Q8TC99 324 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 CXCL16Q9H2A7 254 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 CCDC167Q9P0B6 97 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 PCDHGA7Q9Y5G6 932 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 EEF2KO00418 725 aaKnown RBP11.21□□□□□ -0.62
CCDC40-203ENST00000374877 DLX3O60479 287 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 CYP2C9P11712 490 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 NMBRP28336 390 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 ALDH3B2P48448 385 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 CREB5Q02930 508 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 BST2Q10589 180 aaKnown RBP11.21□□□□□ -0.62
CCDC40-203ENST00000374877 LRRC8EQ6NSJ5 796 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 STRADAQ7RTN6 431 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 RDH11Q8TC12 318 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 ADAMTS10Q9H324 1103 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 OLAHQ9NV23 265 aa11.21□□□□□ -0.62
CCDC40-203ENST00000374877 CROCCQ5TZA2 2017 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 HEATR9A2RTY3 570 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 ZBTB24O43167 697 aaPredicted RBP11.2□□□□□ -0.62
CCDC40-203ENST00000374877 TIPRLO75663 272 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 CAPNS1P04632 268 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 HNRNPLP14866 589 aaKnown RBP eCLIP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms