RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TTC8Q8TAM2 541 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 FRS2Q8WU20 508 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 CYB5D2Q8WUJ1 264 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 LRRC39Q96DD0 335 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 RPL10LQ96L21 214 aaKnown RBP17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 NSMCE3Q96MG7 304 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 TRIB3Q96RU7 358 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 WDR83Q9BRX9 315 aaKnown RBP17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 CIPCQ9C0C6 399 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 C8orf33Q9H7E9 229 aaPredicted RBP17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 ARNT2Q9HBZ2 717 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 UBP1Q9NZI7 540 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 PRKAG3Q9UGI9 489 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 MIA3Q5JRA6 1907 aa17.43■□□□□ 0.38
HLA-DMA-201ENST00000374843 LOC285095A0A1B0GVY8 99 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 SPECC1L-ADORA2AF8WAN1 911 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 ALOX15BO15296 676 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 PMPCBO75439 489 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 APODP05090 189 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 GLULP15104 373 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 SNRPD1P62314 119 aaKnown RBP17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 PFKPQ01813 784 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 SPARCL1Q14515 664 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 ATXN7L2Q5T6C5 722 aaPredicted RBP17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 DENND5AQ6IQ26 1287 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 TRMT10CQ7L0Y3 403 aaKnown RBP17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 ADHFE1Q8IWW8 467 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 AGGF1Q8N302 714 aaeCLIP17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 SORCS1Q8WY21 1168 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 VOPP1Q96AW1 172 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 FICDQ9BVA6 458 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 FSD1LQ9BXM9 530 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 TDRD1Q9BXT4 1180 aaKnown RBP17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 TM6SF2Q9BZW4 377 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 SLCO3A1Q9UIG8 710 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 STARD13Q9Y3M8 1113 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 ARIH1Q9Y4X5 557 aaPredicted RBP17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 TEX264Q9Y6I9 313 aa17.42■□□□□ 0.38
HLA-DMA-201ENST00000374843 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 TTC24A2A3L6 582 aaPredicted RBP17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 WASH3PC4AMC7 463 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 SOCS5O75159 536 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 USP12O75317 370 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 ASGR2P07307 311 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 ATXN1LP0C7T5 689 aaKnown RBP17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 SRFP11831 508 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 HLA-DPA1P20036 260 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 SOX9P48436 509 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 SCNN1BP51168 640 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 CDH17Q12864 832 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 OLIG2Q13516 323 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 TDGQ13569 410 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 E2F5Q15329 346 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 DLG2Q15700 870 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 CCDC25Q86WR0 208 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 SFTPA1Q8IWL2 248 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 OR52K1Q8NGK4 314 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 UCMAQ8WVF2 138 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 SPOCK2Q92563 424 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 TUBGCP5Q96RT8 1024 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 P2RY13Q9BPV8 354 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 EPB41L4BQ9H329 900 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 CDC42EP4Q9H3Q1 356 aaKnown RBP17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 SAYSD1Q9NPB0 183 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 PIAS3Q9Y6X2 628 aa17.41■□□□□ 0.38
HLA-DMA-201ENST00000374843 NPC1O15118 1278 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 HTRA2O43464 458 aaPredicted RBP17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 AVILO75366 819 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 NDST3O95803 873 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 FGF1P05230 155 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 TSHRP16473 764 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 CA4P22748 312 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 NNMTP40261 264 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 MAGEA4P43358 317 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 TNFRSF4P43489 277 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 TNNT3P45378 269 aaPredicted RBP17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 PMS2P54278 862 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 ZP2Q05996 745 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 CDK18Q07002 472 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 TRAF2Q12933 501 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 PDIA2Q13087 525 aaKnown RBP17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 ENPP2Q13822 863 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 FASTKD3Q14CZ7 662 aaKnown RBP17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 UAP1Q16222 522 aaPredicted RBP17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 BBS9Q3SYG4 887 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 CCDC38Q502W7 563 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 CARD16Q5EG05 197 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 TXNDC11Q6PKC3 985 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 NUDT18Q6ZVK8 323 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 Q6ZVU0 165 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 RNF135Q8IUD6 432 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 OR2A12Q8NGT7 310 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 SIGLEC10Q96LC7 697 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 TTC25Q96NG3 672 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 TNKS2Q9H2K2 1166 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 TMEM245Q9H330 911 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 PABPC3Q9H361 631 aaKnown RBP17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 PRDM6Q9NQX0 595 aa17.4■□□□□ 0.38
HLA-DMA-201ENST00000374843 NINJ2Q9NZG7 142 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms