RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 TBC1D3CQ6IPX1 549 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TCEAL6Q6IPX3 200 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PRR23CQ6ZRP0 262 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NT5DC3Q86UY8 548 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TBC1D3Q8IZP1 549 aaPredicted RBP21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 EXD1Q8NHP7 514 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NSMCE1Q8WV22 266 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SNX19Q92543 992 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TCEAL3Q969E4 200 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 KLHL32Q96NJ5 620 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TSGA13Q96PP4 275 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 MIR1-1HGQ9H1L0 117 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 HEY1Q9Y5J3 304 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NUP205Q92621 2012 aa21.26■□□□□ 0.99
MAP1LC3A-202ENST00000374837 THADAQ6YHU6 1953 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 KHNYNO15037 678 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 MX2P20592 715 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CCNCP24863 283 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PEX5P50542 639 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 RENBPP51606 427 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CCR5P51681 352 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NEK3P51956 506 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 DUOXA1Q1HG43 343 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 MARC1Q5VT66 337 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NPNTQ6UXI9 565 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PARS2Q7L3T8 475 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PGBD5Q8N414 524 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 RNF10Q8N5U6 811 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 C1orf216Q8TAB5 229 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ORAI3Q9BRQ5 295 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TSGA10Q9BZW7 698 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 AMFRQ9UKV5 643 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NCOR2Q9Y618 2525 aa21.25■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CCDC66A2RUB6 948 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 MATN3O15232 486 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NRDCO43847 1150 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 GJB3O75712 270 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 KRT37O76014 449 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PIGNO95427 931 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ADRB3P13945 408 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SCNN1BP51168 640 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PPP2CBP62714 309 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 DYNLT1P63172 113 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PPP2CAP67775 309 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 IRX4P78413 519 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ADCY2Q08462 1091 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 HNRNPDQ14103 355 aaKnown RBP21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TFDP2Q14188 446 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ZNF235Q14590 738 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TRIM61Q5EBN2 209 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TFDP3Q5H9I0 405 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 KAZNQ674X7 775 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 FBXL19Q6PCT2 694 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PEX26Q7Z412 305 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CCDC50Q8IVM0 306 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SYCE1Q8N0S2 351 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TEX26Q8N6G2 289 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CCNYQ8ND76 341 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CEP76Q8TAP6 659 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 MAML1Q92585 1016 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 RBM41Q96IZ5 413 aaKnown RBP21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NSMCE3Q96MG7 304 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SUV39H2Q9H5I1 410 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 EBF2Q9HAK2 575 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 GUCA1BQ9UMX6 200 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SLCO1B1Q9Y6L6 691 aa21.24■□□□□ 0.99
MAP1LC3A-202ENST00000374837 hCG_1818297A0A087WSY0 165 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TTC24A2A3L6 582 aaPredicted RBP21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 KRT86O43790 486 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CST8O60676 142 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CCDC175P0C221 793 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 GNSP15586 552 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CD27P26842 260 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 HSPA9P38646 679 aaKnown RBP21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 MMP13P45452 471 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 GRM3Q14832 879 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TIGD7Q6NT04 549 aaPredicted RBP21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SLC23A3Q6PIS1 610 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CAMK1DQ8IU85 385 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 BBS5Q8N3I7 341 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ZCCHC9Q8N567 271 aaKnown RBP21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 C12orf50Q8NA57 414 aaPredicted RBP21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 FATE1Q969F0 183 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 HDAC11Q96DB2 347 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ZNF830Q96NB3 372 aaPredicted RBP21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TUBGCP5Q96RT8 1024 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 LGMNQ99538 433 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PREBQ9HCU5 417 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 RXFP3Q9NSD7 469 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 DKK3Q9UBP4 350 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SUSD2Q9UGT4 822 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SLC6A14Q9UN76 642 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 FADS3Q9Y5Q0 445 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CAPN6Q9Y6Q1 641 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SPAG17Q6Q759 2223 aa21.23■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NYNRINQ9P2P1 1898 aaKnown RBP21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NUMA1Q14980 2115 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CEP250Q9BV73 2442 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 A0A1B0GTW7 788 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms