RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 ATP6V0D2Q8N8Y2 350 aa18.5■□□□□ 0.55
RXRB-202ENST00000374685 SEPT8Q92599 483 aa18.5■□□□□ 0.55
RXRB-202ENST00000374685 CADM1Q9BY67 442 aaKnown RBP18.5■□□□□ 0.55
RXRB-202ENST00000374685 RUVBL2Q9Y230 463 aaKnown RBP18.5■□□□□ 0.55
RXRB-202ENST00000374685 OR51F1A6NGY5 319 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.49■□□□□ 0.55
RXRB-202ENST00000374685 TIMM44O43615 452 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 VNN2O95498 520 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 SERPINE1P05121 402 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 SLC1A2P43004 574 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 SESN3P58005 492 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 NAB1Q13506 487 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 ZNF789Q5FWF6 425 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 PDPK2PQ6A1A2 396 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 KIAA1841Q6NSI8 718 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 IFT43Q96FT9 208 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 KIFC1Q9BW19 673 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 FNDC3AQ9Y2H6 1198 aaKnown RBP18.49■□□□□ 0.55
RXRB-202ENST00000374685 KCTD3Q9Y597 815 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 B2RBV5 119 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 NEMP1O14524 444 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 RAMP2O60895 175 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 SLC2A3P11169 496 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 GM2AP17900 193 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 SP100P23497 879 aaPredicted RBP18.49■□□□□ 0.55
RXRB-202ENST00000374685 ARNTP27540 789 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 HOXC13P31276 330 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 BFSP2Q13515 415 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 IHHQ14623 411 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 BEND5Q7L4P6 421 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 CEP97Q8IW35 865 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 LGI2Q8N0V4 545 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 TSNARE1Q96NA8 513 aa18.49■□□□□ 0.55
RXRB-202ENST00000374685 UXTQ9UBK9 157 aaPredicted RBP18.49■□□□□ 0.55
RXRB-202ENST00000374685 NYNRINQ9P2P1 1898 aaKnown RBP18.48■□□□□ 0.55
RXRB-202ENST00000374685 A0A0D9SEW6 157 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 GOLGA8QA0A0J9YX86 632 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 GOLGA8OA6NCC3 632 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 GOLGA8NF8WBI6 632 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 TMEM189-UBE2V1I3L0A0 370 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 INPPL1O15357 1258 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 ZSCAN9O15535 394 aaPredicted RBP18.48■□□□□ 0.55
RXRB-202ENST00000374685 CHRNGP07510 517 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 ANO4Q32M45 955 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 CFAP157Q5JU67 520 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.48■□□□□ 0.551e-19■■■■■ 54.9
RXRB-202ENST00000374685 FAM126BQ8IXS8 530 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 ZNF781Q8N8C0 355 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 HHIPL1Q96JK4 782 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 BTN2A3PQ96KV6 586 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 TRAPPC9Q96Q05 1148 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 TTPALQ9BTX7 342 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.48■□□□□ 0.55
RXRB-202ENST00000374685 NKX1-2Q9UD57 310 aaPredicted RBP18.48■□□□□ 0.55
RXRB-202ENST00000374685 FIS1Q9Y3D6 152 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 TCAF1Q9Y4C2 921 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 PRRC2BQ5JSZ5 2229 aaKnown RBP18.48■□□□□ 0.55
RXRB-202ENST00000374685 CASP8AP2Q9UKL3 1982 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.48■□□□□ 0.55
RXRB-202ENST00000374685 CCDC22O60826 627 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 ATF6P18850 670 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 CA8P35219 290 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 RENBPP51606 427 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 KLC1Q07866 573 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 PEX6Q13608 980 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 MFSD6LQ8IWD5 586 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 PTCD3Q96EY7 689 aaKnown RBP18.48■□□□□ 0.55
RXRB-202ENST00000374685 CLPTM1LQ96KA5 538 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 DENND2DQ9H6A0 471 aaPredicted RBP18.48■□□□□ 0.55
RXRB-202ENST00000374685 GKN1Q9NS71 199 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 TAS2R1Q9NYW7 299 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 CDH23Q9H251 3354 aa18.48■□□□□ 0.55
RXRB-202ENST00000374685 GJB5O95377 273 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 ACADSP16219 412 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 RHOQP17081 205 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 CALB2P22676 271 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 ABCE1P61221 599 aaKnown RBP18.47■□□□□ 0.55
RXRB-202ENST00000374685 GALNT3Q14435 633 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 C1QTNF12Q5T7M4 302 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 CNSTQ6PJW8 725 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 ARHGAP18Q8N392 663 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 CCNYL1Q8N7R7 359 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 BLOC1S5Q8TDH9 187 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 PXYLP1Q8TE99 480 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 INPP5DQ92835 1189 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 SORT1Q99523 831 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 SUDS3Q9H7L9 328 aaPredicted RBP18.47■□□□□ 0.55
RXRB-202ENST00000374685 RNPEPL1Q9HAU8 725 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 ENTPD7Q9NQZ7 604 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 SAR1AQ9NR31 198 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 SMPD4Q9NXE4 827 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.47■□□□□ 0.55
RXRB-202ENST00000374685 FAM95CA0A1B0GW59 222 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 OR6C75A6NL08 312 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 TSPAN3O60637 253 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 DNAJB2P25686 324 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 ALDH7A1P49419 539 aaKnown RBP18.47■□□□□ 0.55
RXRB-202ENST00000374685 RPS24P62847 133 aaKnown RBP18.47■□□□□ 0.55
RXRB-202ENST00000374685 MTA1Q13330 715 aa18.47■□□□□ 0.55
RXRB-202ENST00000374685 RBM20Q5T481 1227 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms