RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 POLR1EQ9GZS1 481 aaKnown RBP11.51□□□□□ -0.57
HSPG2-202ENST00000374676 ZDHHC6Q9H6R6 413 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 USP29Q9HBJ7 922 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 HOMER3Q9NSC5 361 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 TRHDEQ9UKU6 1024 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 SAR1BQ9Y6B6 198 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 WDFY4Q6ZS81 3184 aa11.51□□□□□ -0.57
HSPG2-202ENST00000374676 CFAP69A5D8W1 941 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 H0Y858 1186 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 KPNA3O00505 521 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-202ENST00000374676 KRIT1O00522 736 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 FANCGO15287 622 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 INSIG1O15503 277 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 LIASO43766 372 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 NEBLO76041 1014 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 HLA-DQB2P05538 268 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 ITGB7P26010 798 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 STIP1P31948 543 aaKnown RBP11.5□□□□□ -0.57
HSPG2-202ENST00000374676 GKP32189 559 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 PTPN5P54829 565 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 OASLQ15646 514 aaKnown RBP11.5□□□□□ -0.57
HSPG2-202ENST00000374676 LONRF2Q1L5Z9 754 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 ZNF805Q5CZA5 627 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 GDPD4Q6W3E5 623 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 B4GALNT4Q76KP1 1039 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 C11orf74Q86VG3 221 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 AADATQ8N5Z0 425 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 OR6K2Q8NGY2 324 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 ARRDC2Q8TBH0 407 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 GRIN3AQ8TCU5 1115 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 COG1Q8WTW3 980 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 GAB3Q8WWW8 586 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 NKD2Q969F2 451 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-202ENST00000374676 ARRDC3Q96B67 414 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 PPP1R16AQ96I34 528 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 NSMCE3Q96MG7 304 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 SEMA3CQ99985 751 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 FAM118BQ9BPY3 351 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 HDAC8Q9BY41 377 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 SUV39H2Q9H5I1 410 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 ATP13A3Q9H7F0 1226 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 NOD2Q9HC29 1040 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 SCUBE2Q9NQ36 999 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 FBXL12Q9NXK8 326 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 WSB2Q9NYS7 404 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-202ENST00000374676 SEPT10Q9P0V9 454 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 DKK3Q9UBP4 350 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 DNPEPQ9ULA0 475 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 FZD4Q9ULV1 537 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 DRG1Q9Y295 367 aaKnown RBP11.5□□□□□ -0.57
HSPG2-202ENST00000374676 NCKAP1Q9Y2A7 1128 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 RIF1Q5UIP0 2472 aaKnown RBP11.5□□□□□ -0.57
HSPG2-202ENST00000374676 TRPM6Q9BX84 2022 aa11.5□□□□□ -0.57
HSPG2-202ENST00000374676 KNL1Q8NG31 2342 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 GPR179Q6PRD1 2367 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 IGHV1OR15-9A0A0B4J2B8 117 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 RNF103O00237 685 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
HSPG2-202ENST00000374676 SLC7A4O43246 635 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 HTRA2O43464 458 aaPredicted RBP11.49□□□□□ -0.57
HSPG2-202ENST00000374676 HRO43593 1189 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 UGT2B4P06133 528 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 SERPINA4P29622 427 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 CASQ1P31415 396 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 DRD3P35462 400 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 SUOXP51687 545 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 MAXP61244 160 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 BCL2L1Q07817 233 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 ITKQ08881 620 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 NIPAL4Q0D2K0 466 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 CNTN1Q12860 1018 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 SLC14A2Q15849 920 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 ZC3H14Q6PJT7 736 aaKnown RBP11.49□□□□□ -0.57
HSPG2-202ENST00000374676 SLC36A4Q6YBV0 504 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 ERN2Q76MJ5 926 aaKnown RBP11.49□□□□□ -0.57
HSPG2-202ENST00000374676 ADAT2Q7Z6V5 191 aaKnown RBP11.49□□□□□ -0.57
HSPG2-202ENST00000374676 CACUL1Q86Y37 369 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 CAMK1DQ8IU85 385 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 ZNF567Q8N184 647 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 HDDC3Q8N4P3 179 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 PRELID2Q8N945 189 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 C1orf54Q8WWF1 131 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 RLN3Q8WXF3 142 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 ECHDC3Q96DC8 303 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 MS4A14Q96JA4 679 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 KLHL32Q96NJ5 620 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 AGAP3Q96P47 875 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 OMDQ99983 421 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 SLC25A51Q9H1U9 297 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 C10orf88Q9H8K7 445 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 SGK2Q9HBY8 427 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 GLOD4Q9HC38 313 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 DYRK4Q9NR20 520 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 RNF14Q9UBS8 474 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 CYP8B1Q9UNU6 501 aa11.49□□□□□ -0.57
HSPG2-202ENST00000374676 DOCK9Q9BZ29 2069 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 A0A1W2PP55 124 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 A0A1W2PQ67 120 aa11.48□□□□□ -0.57
HSPG2-202ENST00000374676 TSPAN11A1L157 253 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms