RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 KIAA0754O94854 1291 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 LUC7L3O95232 432 aaKnown RBP17.08■□□□□ 0.32
PTPN20-203ENST00000374342 ATXN1LP0C7T5 689 aaKnown RBP17.08■□□□□ 0.32
PTPN20-203ENST00000374342 PAMP19021 973 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 SERPINB4P48594 390 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 SERPINB8P50452 374 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 CLCN4P51793 760 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 SLC7A9P82251 487 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 CDH18Q13634 790 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 ALG1LQ6GMV1 187 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 CMC1Q7Z7K0 106 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 ARMC2Q8NEN0 867 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 SPPL3Q8TCT6 385 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 MICAL1Q8TDZ2 1067 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 VPS11Q9H270 941 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 SNX15Q9NRS6 342 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 TREX1Q9NSU2 369 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 NSMCE4AQ9NXX6 385 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 PHTF1Q9UMS5 762 aa17.08■□□□□ 0.32
PTPN20-203ENST00000374342 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
PTPN20-203ENST00000374342 SERPINF2P08697 491 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 NEFHP12036 1026 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 ARNTP27540 789 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 CRHR1P34998 444 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 RGRP47804 291 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 PDE1CQ14123 709 aaPredicted RBP17.07■□□□□ 0.32
PTPN20-203ENST00000374342 GALNT3Q14435 633 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 ITIH4Q14624 930 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 CNGA3Q16281 694 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 FSCBQ5H9T9 825 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 KIAA0930Q6ICG6 404 aaPredicted RBP17.07■□□□□ 0.32
PTPN20-203ENST00000374342 FSTL4Q6MZW2 842 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 ATP2A3Q93084 1043 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 TMA16Q96EY4 203 aaKnown RBP17.07■□□□□ 0.32
PTPN20-203ENST00000374342 VPS39Q96JC1 886 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 FEM1CQ96JP0 617 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 PSKH2Q96QS6 385 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 RANBP9Q96S59 729 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 SMG9Q9H0W8 520 aaKnown RBP17.07■□□□□ 0.32
PTPN20-203ENST00000374342 MTIF3Q9H2K0 278 aaKnown RBP17.07■□□□□ 0.32
PTPN20-203ENST00000374342 MAN1C1Q9NR34 630 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 VPS28Q9UK41 221 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 RWDD3Q9Y3V2 267 aa17.07■□□□□ 0.32
PTPN20-203ENST00000374342 ATXN2Q99700 1313 aaKnown RBP17.07■□□□□ 0.32
PTPN20-203ENST00000374342 E2F8A0AVK6 867 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 ANKRD65E5RJM6 399 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 TIMM44O43615 452 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 SNAP91O60641 907 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 GLRA3O75311 464 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 RFPL2O75678 378 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 ARHGEF15O94989 841 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 MZF1P28698 734 aaPredicted RBP17.06■□□□□ 0.32
PTPN20-203ENST00000374342 TYK2P29597 1187 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 ARCN1P48444 511 aaKnown RBP17.06■□□□□ 0.32
PTPN20-203ENST00000374342 ARF5P84085 180 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 CDK18Q07002 472 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 RFTN1Q14699 578 aaPredicted RBP17.06■□□□□ 0.32
PTPN20-203ENST00000374342 C6orf89Q6UWU4 347 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 LINGO4Q6UY18 593 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 ZNF783Q6ZMS7 281 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 BBS7Q8IWZ6 715 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 WFDC5Q8TCV5 224 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 MTO1Q9Y2Z2 717 aaKnown RBP17.06■□□□□ 0.32
PTPN20-203ENST00000374342 RRP15Q9Y3B9 282 aaKnown RBP17.06■□□□□ 0.32
PTPN20-203ENST00000374342 CCDC195A0A1B0GUA6 201 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 LOC285095A0A1B0GVY8 99 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 EDF1O60869 148 aaKnown RBP17.06■□□□□ 0.32
PTPN20-203ENST00000374342 FGF1P05230 155 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 MYOGP15173 224 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 HLA-DPA1P20036 260 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 BGNP21810 368 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 CSKP41240 450 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 CCR2P41597 374 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 MPP1Q00013 466 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 THOC5Q13769 683 aaKnown RBP17.06■□□□□ 0.32
PTPN20-203ENST00000374342 TSTD2Q5T7W7 516 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 RNF187Q5TA31 235 aaPredicted RBP17.06■□□□□ 0.32
PTPN20-203ENST00000374342 MFN1Q8IWA4 741 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 DENND6AQ8IWF6 608 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 FAM217AQ8IXS0 508 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 CNPY4Q8N129 248 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 TDRD5Q8NAT2 981 aaKnown RBP17.06■□□□□ 0.32
PTPN20-203ENST00000374342 PTPRN2Q92932 1015 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 THOC1Q96FV9 657 aaKnown RBP17.06■□□□□ 0.32
PTPN20-203ENST00000374342 MECRQ9BV79 373 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 MANSC1Q9H8J5 431 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 NOD2Q9HC29 1040 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 SCUBE2Q9NQ36 999 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 GGT7Q9UJ14 662 aa17.06■□□□□ 0.32
PTPN20-203ENST00000374342 ATG2AQ2TAZ0 1938 aa17.05■□□□□ 0.32
PTPN20-203ENST00000374342 BPTFQ12830 3046 aa17.05■□□□□ 0.32
PTPN20-203ENST00000374342 GFRA2O00451 464 aa17.05■□□□□ 0.32
PTPN20-203ENST00000374342 PRKCGP05129 697 aa17.05■□□□□ 0.32
PTPN20-203ENST00000374342 IRS1P35568 1242 aa17.05■□□□□ 0.32
PTPN20-203ENST00000374342 GMPRP36959 345 aa17.05■□□□□ 0.32
PTPN20-203ENST00000374342 SLC1A2P43004 574 aa17.05■□□□□ 0.32
PTPN20-203ENST00000374342 SCNN1BP51168 640 aa17.05■□□□□ 0.32
PTPN20-203ENST00000374342 IRX4P78413 519 aa17.05■□□□□ 0.32
PTPN20-203ENST00000374342 PPM1JQ5JR12 505 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms