RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PCDHB12Q9Y5F1 795 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 NEMP2A6NFY4 417 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 DCXO43602 365 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 TLR5O60602 858 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 PQBP1O60828 265 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 MMP2P08253 660 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 RENBPP51606 427 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 CCL23P55773 120 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 POLD3Q15054 466 aaPredicted RBP16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 NADSYN1Q6IA69 706 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 POTEHQ6S545 545 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 RPS27LQ71UM5 84 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 KLHDC8BQ8IXV7 354 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 ATP6V0D2Q8N8Y2 350 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 OR6Y1Q8NGX8 325 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 BTN2A3PQ96KV6 586 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 OR52B2Q96RD2 323 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 SUDS3Q9H7L9 328 aaPredicted RBP16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 TLR8Q9NR97 1041 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 TREX1Q9NSU2 369 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 OXSMQ9NWU1 459 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 FBXO5Q9UKT4 447 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 A0A0D9SEW6 157 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 MUSKO15146 869 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 SORBS2O94875 1100 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 SLC2A3P11169 496 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 CDK7P50613 346 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 ATN1P54259 1190 aaPredicted RBP16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 MRPL58Q14197 206 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 RCN1Q15293 331 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 RALGPS1Q5JS13 557 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 WASHC2DQ5SRD0 308 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 NEPROQ6NW34 567 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 CCNYL1Q8N7R7 359 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 OR6P1Q8NGX9 317 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 FAM136AQ96C01 138 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 IMP4Q96G21 291 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 TSNARE1Q96NA8 513 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 ZNF570Q96NI8 536 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 CYP4F11Q9HBI6 524 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 TMEM248Q9NWD8 314 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 ACOT9Q9Y305 439 aa16.15■□□□□ 0.18
CNKSR1-202ENST00000374253 AP3B1O00203 1094 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 RAMP2O60895 175 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 STMN1P16949 149 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 ATF6P18850 670 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 HOXD10P28358 340 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 HTR7P34969 479 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 ARSDP51689 593 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 RAB10P61026 200 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 SLC12A1Q13621 1099 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 HNRNPDQ14103 355 aaKnown RBP16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 TRIP4Q15650 581 aaPredicted RBP16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 DBN1Q16643 649 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 TMPRSS6Q8IU80 811 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 SH3RF2Q8TEC5 729 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 CDH19Q9H159 772 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 PIGNO95427 931 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 JUNP05412 331 aaKnown RBP16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 FGFR3P22607 806 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 SERPINH1P50454 418 aaKnown RBP16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 CSHL1Q14406 222 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 GALNT3Q14435 633 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 ARL13AQ5H913 290 aaPredicted RBP16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 PDE4DIPQ5VU43 2346 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 SNX30Q5VWJ9 437 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 FAM91A1Q658Y4 838 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 LRRC8EQ6NSJ5 796 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 DEFB128Q7Z7B8 93 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 ARHGAP18Q8N392 663 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 SLC43A3Q8NBI5 491 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 TTC16Q8NEE8 873 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 OLFM1Q99784 485 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 CYP4F12Q9HCS2 524 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 FIS1Q9Y3D6 152 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 SCN5AQ14524 2016 aa16.14■□□□□ 0.17
CNKSR1-202ENST00000374253 WASH4PA8MWX3 477 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 TMEM233B4DJY2 109 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 ZBTB14O43829 449 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 DLX3O60479 287 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 GALTP07902 379 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 GNAZP19086 355 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 EPHA3P29320 983 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 MAGEA11P43364 429 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 CD151P48509 253 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 PTDSS1P48651 473 aaKnown RBP16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 NDST2P52849 883 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 GPR17Q13304 367 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 DEFB115Q30KQ5 88 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 SIRPB2Q5JXA9 342 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 CNTN4Q8IWV2 1026 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 LGI2Q8N0V4 545 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 OR52K2Q8NGK3 314 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 OR13J1Q8NGT2 312 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 EXOC2Q96KP1 924 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 SEMA3CQ99985 751 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 NUF2Q9BZD4 464 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 OR6C75A6NL08 312 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 GJB5O95377 273 aa16.13■□□□□ 0.17
CNKSR1-202ENST00000374253 MAP2K2P36507 400 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms