RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SLC44A4Q53GD3 710 aa14.97□□□□□ -0.01
COL9A2-202ENST00000372748 MARCH8Q5T0T0 291 aa14.97□□□□□ -0.01
COL9A2-202ENST00000372748 OR9I1Q8NGQ6 314 aa14.97□□□□□ -0.01
COL9A2-202ENST00000372748 STYXQ8WUJ0 223 aa14.97□□□□□ -0.01
COL9A2-202ENST00000372748 BIRC8Q96P09 236 aa14.97□□□□□ -0.01
COL9A2-202ENST00000372748 SUCOQ9UBS9 1254 aaKnown RBP14.97□□□□□ -0.01
COL9A2-202ENST00000372748 SQORQ9Y6N5 450 aa14.97□□□□□ -0.01
COL9A2-202ENST00000372748 ASB14A6NK59 587 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 FAM72CH0Y354 149 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 NRP1O14786 923 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 FUT4P22083 530 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 ADSLP30566 484 aaPredicted RBP14.96□□□□□ -0.01
COL9A2-202ENST00000372748 CTBP1Q13363 440 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 GRIK4Q16099 956 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 NHSL2Q5HYW2 709 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 FAM72AQ5TYM5 149 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 REP15Q6BDI9 236 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 FAM72DQ6L9T8 149 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 Q6ZNX1 250 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 FASTKD5Q7L8L6 764 aaKnown RBP14.96□□□□□ -0.01
COL9A2-202ENST00000372748 ZC3HC1Q86WB0 502 aaKnown RBP14.96□□□□□ -0.01
COL9A2-202ENST00000372748 FAM72BQ86X60 149 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 CEP97Q8IW35 865 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 ANKRD13AQ8IZ07 590 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 CANT1Q8WVQ1 401 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 PAIP1Q9H074 479 aaKnown RBP14.96□□□□□ -0.01
COL9A2-202ENST00000372748 UNC93B1Q9H1C4 597 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 GOLGA2P5Q9HBQ8 144 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 CYP4F12Q9HCS2 524 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 GTF2IRD1Q9UHL9 959 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 MID2Q9UJV3 735 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 PSMD12O00232 456 aaPredicted RBP14.96□□□□□ -0.01
COL9A2-202ENST00000372748 CXCL11O14625 94 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 COQ9O75208 318 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 GABRB3P28472 473 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 HOXA11P31270 313 aaPredicted RBP14.96□□□□□ -0.01
COL9A2-202ENST00000372748 TSTD2Q5T7W7 516 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 CNSTQ6PJW8 725 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 CATSPER4Q7RTX7 472 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 DENND6AQ8IWF6 608 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 SLC2A14Q8TDB8 520 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 MLPHQ9BV36 600 aaPredicted RBP14.96□□□□□ -0.01
COL9A2-202ENST00000372748 ANKRD60Q9BZ19 345 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 NXF3Q9H4D5 531 aaKnown RBP14.96□□□□□ -0.01
COL9A2-202ENST00000372748 MROH8Q9H579 483 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 TNFRSF12AQ9NP84 129 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 PCDHGA4Q9Y5G9 962 aa14.96□□□□□ -0.01
COL9A2-202ENST00000372748 SLCO1B7G3V0H7 640 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 ATE1O95260 518 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 STAU1O95793 577 aaKnown RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 APOA4P06727 396 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 GRIA3P42263 894 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 NUP107P57740 925 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 ESRRGP62508 458 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 PRKCQQ04759 706 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 SFSWAPQ12872 951 aaKnown RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 FASTKQ14296 549 aaKnown RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 ZNF280DQ6N043 979 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 TTC33Q6PID6 262 aaPredicted RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 GPR180Q86V85 440 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 NT5DC4Q86YG4 428 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 ZDHHC17Q8IUH5 632 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 TTC39CQ8N584 583 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 OSMRQ99650 979 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 GPR22Q99680 433 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 AURKCQ9UQB9 309 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 EEF2KO00418 725 aaKnown RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 TRIM24O15164 1050 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 SPTLC1O15269 473 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 AHSGP02765 367 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 SLC7A1P30825 629 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 RABGGTBP53611 331 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 MPP1Q00013 466 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 LRP8Q14114 963 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 KYAT1Q16773 422 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 C6orf10Q5SRN2 563 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 XKR5Q6UX68 686 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 CBR4Q8N4T8 237 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 LZTR1Q8N653 840 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 FTHL17Q9BXU8 183 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 IL1RL2Q9HB29 575 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 SPAG4Q9NPE6 437 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 CASS4Q9NQ75 786 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 SMOXQ9NWM0 555 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 RNF181Q9P0P0 153 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 SLC8A2Q9UPR5 921 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 ATP6AP2A0A1C7CYW4 349 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 TARM1B6A8C7 271 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 ATP6AP2O75787 350 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 PGK1P00558 417 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 CD68P34810 354 aaPredicted RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 GNL1P36915 607 aaPredicted RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 PLK1P53350 603 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 CSE1LP55060 971 aaKnown RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 C1QTNF8P60827 252 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 BST2Q10589 180 aaKnown RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 SLC12A1Q13621 1099 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 IL31Q6EBC2 164 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 CROCCP3Q8IVE0 287 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 HOMEZQ8IX15 550 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms