RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SERAC1Q96JX3 654 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 PPP3R2Q96LZ3 170 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC9A7Q96T83 725 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 APOL4Q9BPW4 351 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 RAD18Q9NS91 495 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 KRT84Q9NSB2 600 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 ZMYM5Q9UJ78 669 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 PADI4Q9UM07 663 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 KPNA5O15131 536 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 TLR5O60602 858 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 GCATO75600 419 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 KRT36O76013 467 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 TYMPP19971 482 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 WEE1P30291 646 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 PRKG2Q13237 762 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 SWT1Q5T5J6 900 aaKnown RBP11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 CMC1Q7Z7K0 106 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 ANKRD23Q86SG2 305 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 DSG4Q86SJ6 1040 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 SVOPQ8N4V2 548 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 ZSCAN18Q8TBC5 510 aaPredicted RBP11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 SLCO2A1Q92959 643 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 POP5Q969H6 163 aaKnown RBP11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 HDAC10Q969S8 669 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 HNRNPABQ99729 332 aaKnown RBP11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 CDH19Q9H159 772 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 KRCC1Q9NPI7 259 aaPredicted RBP11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 C6orf203Q9P0P8 240 aaPredicted RBP11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 GNPTGQ9UJJ9 305 aa11.96□□□□□ -0.5
DEPDC1-201ENST00000370966 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 SOWAHBA6NEL2 793 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 XYLBO75191 536 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 PAGE1O75459 146 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 RPN2P04844 631 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 GPR15P49685 360 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 DNAJC14Q6Y2X3 702 aaPredicted RBP11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 C16orf59Q7L2K0 433 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 NECAB2Q7Z6G3 386 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 ULK2Q8IYT8 1036 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 OMDQ99983 421 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 MECRQ9BV79 373 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 ADPRHL2Q9NX46 363 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 TPRKBQ9Y3C4 175 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 BUD23O43709 281 aaKnown RBP11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 RASSF9O75901 435 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 ANPEPP15144 967 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 HDCP19113 662 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 POU1F1P28069 291 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 SOX6P35712 828 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 IRF8Q02556 426 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 SKIV2LQ15477 1246 aaKnown RBP11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 CCDC149Q6ZUS6 474 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 PHACTR4Q8IZ21 702 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 FBXW8Q8N3Y1 598 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 SELENOMQ8WWX9 145 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 ATL1Q8WXF7 558 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 GLMNQ92990 594 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 ZNF558Q96NG5 402 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 KLHL28Q9NXS3 571 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 TMEM216Q9P0N5 145 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 KLQ9UEF7 1012 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 INVSQ9Y283 1065 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 KRT87PA6NCN2 255 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 EPHA3P29320 983 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 BRCC3P46736 316 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 YBEYP58557 167 aaPredicted RBP11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 BNIP2Q12982 314 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 ADHFE1Q8IWW8 467 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 NIPA2Q8N8Q9 360 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 MED8Q96G25 268 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 PAWRQ96IZ0 340 aaKnown RBP11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 NDNQ99608 321 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 BBS2Q9BXC9 721 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 RAD21L1Q9H4I0 556 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 MAN1C1Q9NR34 630 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 TMEM39AQ9NV64 488 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 MRPL42Q9Y6G3 142 aaKnown RBP11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 LRRC37A3O60309 1634 aa11.95□□□□□ -0.5
DEPDC1-201ENST00000370966 PRR23AA6NEV1 266 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 QSOX1O00391 747 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 AZIN1O14977 448 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 PEX11AO75192 247 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 AP2A1O95782 977 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 ATP6V1C1P21283 382 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 L1CAMP32004 1257 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 TTC23Q5W5X9 447 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 ECHDC2Q86YB7 292 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 LRRN4Q8WUT4 740 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 BTN2A3PQ96KV6 586 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 NDEL1Q9GZM8 345 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 ATP13A3Q9H7F0 1226 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 SPG21Q9NZD8 308 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 WRAP73Q9P2S5 460 aaPredicted RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 SNX6Q9UNH7 406 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 RPTORQ8N122 1335 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 FAM220BPB1ANY3 271 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC9A3R1O14745 358 aaPredicted RBP11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 MFSD11O43934 449 aa11.94□□□□□ -0.5
DEPDC1-201ENST00000370966 ULK1O75385 1050 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms