RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 EQTNQ9NQ60 294 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 TOR4AQ9NXH8 423 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 ARIH1Q9Y4X5 557 aaPredicted RBP8.62□□□□□ -1.03
ABCA4-201ENST00000370225 LMTK2Q8IWU2 1503 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 MYL12BO14950 172 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 SGTAO43765 313 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 FTH1P02794 183 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 HOXC6P09630 235 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 TSPAN19P0C672 248 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 PPM1AP35813 382 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 SCTRP47872 440 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 NUP107P57740 925 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 CTBP1Q13363 440 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 ARMCX4Q5H9R4 360 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 CDKAL1Q5VV42 579 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 C9orf57Q5W0N0 161 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 PPP2R2DQ66LE6 453 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 DENND6AQ8IWF6 608 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 ADGRG2Q8IZP9 1017 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 THAP1Q9NVV9 213 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 SPATA31C2B4DYI2 1134 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 PLSCR1O15162 318 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 CYP3A4P08684 503 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 ITGAXP20702 1163 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 MAT2AP31153 395 aaKnown RBP8.62□□□□□ -1.03
ABCA4-201ENST00000370225 HK2P52789 917 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 TSNQ15631 228 aaKnown RBP8.62□□□□□ -1.03
ABCA4-201ENST00000370225 TRIM16LQ309B1 348 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 ZCWPW2Q504Y3 356 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 PLEKHA7Q6IQ23 1121 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 MYCBPAPQ8TBZ2 947 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 OXNAD1Q96HP4 312 aaPredicted RBP8.62□□□□□ -1.03
ABCA4-201ENST00000370225 B3GNT5Q9BYG0 378 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 NRDE2Q9H7Z3 1164 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 ANAPC2Q9UJX6 822 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 GIT1Q9Y2X7 761 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 KIDINS220Q9ULH0 1771 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 UBOX5O94941 541 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 LINC00032P0C843 101 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 ZNF37AP17032 561 aaPredicted RBP8.62□□□□□ -1.03
ABCA4-201ENST00000370225 LRPAP1P30533 357 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 NEK3P51956 506 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 RPL38P63173 70 aaKnown RBP8.62□□□□□ -1.03
ABCA4-201ENST00000370225 PTPRNQ16849 979 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 RFWD3Q6PCD5 774 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 GCNT7Q6ZNI0 430 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 PLPPR4Q7Z2D5 763 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 NMD3Q96D46 503 aaKnown RBP8.62□□□□□ -1.03
ABCA4-201ENST00000370225 VCPIP1Q96JH7 1222 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 C1orf50Q9BV19 199 aa8.62□□□□□ -1.03
ABCA4-201ENST00000370225 OXCT2Q9BYC2 517 aaPredicted RBP8.62□□□□□ -1.03
ABCA4-201ENST00000370225 KIF1CO43896 1103 aaKnown RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 LTA4HP09960 611 aaKnown RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 NR2F1P10589 423 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 SELPP16109 830 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 ZNF143P52747 638 aaPredicted RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 RHBDL3P58872 404 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 CBX2Q14781 532 aaPredicted RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 ALG11Q2TAA5 492 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 PAPD7Q5XG87 772 aaKnown RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 KLHL24Q6TFL4 600 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 APTXQ7Z2E3 356 aaKnown RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 RAVER1Q8IY67 606 aaKnown RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 TMEM161BQ8NDZ6 487 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 CDRT15Q96T59 188 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 DMGDHQ9UI17 866 aaKnown RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 ADAM28Q9UKQ2 775 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 A0A0A0MRY4 1105 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 A0A1B0GW55 424 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 AVILO75366 819 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 PAGE1O75459 146 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 DUX4L2P0CJ85 424 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 DUX4L3P0CJ86 424 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 DUX4L4P0CJ87 422 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 DUX4L5P0CJ88 424 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 DUX4L6P0CJ89 424 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 DUX4L7P0CJ90 424 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 ATP4AP20648 1035 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 CORO1AP31146 461 aaKnown RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 RPL9P32969 192 aaKnown RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 TAF10Q12962 218 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 SF1Q15637 639 aaKnown RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 FKBP1CQ5VVH2 108 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 EEF1DP3Q658K8 133 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 POLNQ7Z5Q5 900 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 UNC93AQ86WB7 457 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 ZNF557Q8N988 423 aaPredicted RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 ANKRD52Q8NB46 1076 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 ATAD1Q8NBU5 361 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 RAD51AP1Q96B01 352 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 SPATA13Q96N96 652 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 TRIM8Q9BZR9 551 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 DUX4Q9UBX2 424 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 ASTN1O14525 1302 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 ITPKBP27987 946 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 IFNGR2P38484 337 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 GSTM5P46439 218 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 RRP1BQ14684 758 aaKnown RBP8.61□□□□□ -1.03
ABCA4-201ENST00000370225 UBXN2BQ14CS0 331 aa8.61□□□□□ -1.03
ABCA4-201ENST00000370225 CNGA2Q16280 664 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 247.6 ms