RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 POLR2LP62875 67 aaKnown RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 SRSF5Q13243 272 aaKnown RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 ZNF211Q13398 564 aaPredicted RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 PLK5Q496M5 336 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 ERN2Q76MJ5 926 aaKnown RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 ZC3H18Q86VM9 953 aaKnown RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 CDKL3Q8IVW4 592 aaPredicted RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 FAM160A2Q8N612 972 aaPredicted RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 OR14C36Q8NHC7 312 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 RAB7BQ96AH8 199 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 TRIM44Q96DX7 344 aaPredicted RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 NUDCD1Q96RS6 583 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 VAT1Q99536 393 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 MGME1Q9BQP7 344 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 GPR174Q9BXC1 333 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 FRMD8P1Q9BZ68 369 aaPredicted RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 DUSP15Q9H1R2 295 aaPredicted RBP13.94□□□□□ -0.18
SSR4-202ENST00000370085 NEUROG2Q9H2A3 272 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 SARDHQ9UL12 918 aa13.94□□□□□ -0.18
SSR4-202ENST00000370085 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.186e-9■□□□□ 9.1
SSR4-202ENST00000370085 ABCA7Q8IZY2 2146 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 MEI4A8MW99 385 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 SOCS5O75159 536 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 PEX11BO96011 259 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 PECAM1P16284 738 aaPredicted RBP13.93□□□□□ -0.18
SSR4-202ENST00000370085 TNNT3P45378 269 aaPredicted RBP13.93□□□□□ -0.18
SSR4-202ENST00000370085 DHPSP49366 369 aaPredicted RBP13.93□□□□□ -0.18
SSR4-202ENST00000370085 IFI35P80217 286 aaPredicted RBP13.93□□□□□ -0.18
SSR4-202ENST00000370085 OTUD4Q01804 1114 aaKnown RBP13.93□□□□□ -0.18
SSR4-202ENST00000370085 CNTN1Q12860 1018 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 NOMO1Q15155 1222 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 POM121L1PQ3SYA9 428 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 SLC45A4Q5BKX6 768 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 WDR45BQ5MNZ6 344 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 LYSMD4Q5XG99 296 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 PMS2CLQ68D20 193 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 BRAT1Q6PJG6 821 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 RABEPKQ7Z6M1 372 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 ZSCAN30Q86W11 494 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 NDUFAF2Q8N183 169 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 AADATQ8N5Z0 425 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 OR2T34Q8NGX1 318 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 ACTL9Q8TC94 416 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 KLHL32Q96NJ5 620 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 NAP1L3Q99457 506 aaPredicted RBP13.93□□□□□ -0.18
SSR4-202ENST00000370085 SUV39H2Q9H5I1 410 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 PREBQ9HCU5 417 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 NCDNQ9UBB6 729 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 SAE1Q9UBE0 346 aaPredicted RBP13.93□□□□□ -0.18
SSR4-202ENST00000370085 DKK3Q9UBP4 350 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 MBD1Q9UIS9 605 aaPredicted RBP13.93□□□□□ -0.18
SSR4-202ENST00000370085 CEP192Q8TEP8 1941 aa13.93□□□□□ -0.18
SSR4-202ENST00000370085 SDK1Q7Z5N4 2213 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 VPS13AQ96RL7 3174 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TBC1D3DA0A087WVF3 549 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TBC1D3IA0A087WXS9 549 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TBC1D3EA0A087X179 549 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TBC1D3KA0A087X1G2 549 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TBC1D3FA6NER0 549 aaPredicted RBP13.92□□□□□ -0.18
SSR4-202ENST00000370085 FAM47DPA6NHR8 397 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 C16orf96A6NNT2 1141 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TBC1D3LB9A6J9 549 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 KCNK1O00180 336 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 NEMP1O14524 444 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 INSIG1O15503 277 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 JCHAINP01591 159 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 SERPINF2P08697 491 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TBC1D3HP0C7X1 549 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 BCKDHBP21953 392 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 DRD3P35462 400 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 NUDT1P36639 197 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 EIF3EP60228 445 aaKnown RBP13.92□□□□□ -0.18
SSR4-202ENST00000370085 PRKD1Q15139 912 aaPredicted RBP13.92□□□□□ -0.18
SSR4-202ENST00000370085 TBC1D3GQ6DHY5 549 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TBC1D3CQ6IPX1 549 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 ERAP2Q6P179 960 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 NEK5Q6P3R8 708 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 DARS2Q6PI48 645 aaKnown RBP13.92□□□□□ -0.18
SSR4-202ENST00000370085 CYP2U1Q7Z449 544 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TMEFF1Q8IYR6 380 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TBC1D3Q8IZP1 549 aaPredicted RBP13.92□□□□□ -0.18
SSR4-202ENST00000370085 HTR3CQ8WXA8 447 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 PBKQ96KB5 322 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 QKIQ96PU8 341 aaKnown RBP eCLIP13.92□□□□□ -0.18
SSR4-202ENST00000370085 HINFPQ9BQA5 517 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TLR10Q9BXR5 811 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 RAPGEFL1Q9UHV5 662 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 TRHDEQ9UKU6 1024 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 PYCARDQ9ULZ3 195 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 PCDHGA5Q9Y5G8 931 aa13.92□□□□□ -0.18
SSR4-202ENST00000370085 PLRG1O43660 514 aaKnown RBP13.91□□□□□ -0.18
SSR4-202ENST00000370085 RETP07949 1114 aa13.91□□□□□ -0.18
SSR4-202ENST00000370085 RBP3P10745 1247 aa13.91□□□□□ -0.18
SSR4-202ENST00000370085 ADRB3P13945 408 aa13.91□□□□□ -0.18
SSR4-202ENST00000370085 GNSP15586 552 aa13.91□□□□□ -0.18
SSR4-202ENST00000370085 GKP32189 559 aa13.91□□□□□ -0.18
SSR4-202ENST00000370085 ACSL1P33121 698 aa13.91□□□□□ -0.18
SSR4-202ENST00000370085 HOXD12P35452 270 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms