RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 IRF9Q00978 393 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 KDSRQ06136 332 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 RING1Q06587 406 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 RCN2Q14257 317 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 KHDC1Q4VXA5 237 aaKnown RBP13.31□□□□□ -0.28
ECM1-202ENST00000369047 CFAP157Q5JU67 520 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 LIPMQ5VYY2 423 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 ESRP1Q6NXG1 681 aaKnown RBP13.31□□□□□ -0.28
ECM1-202ENST00000369047 RFWD3Q6PCD5 774 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 KDELC1Q6UW63 502 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 EPGNQ6UW88 154 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 NET1Q7Z628 596 aaPredicted RBP13.31□□□□□ -0.28
ECM1-202ENST00000369047 SCUBE1Q8IWY4 988 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 ABI1Q8IZP0 508 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 TEX26Q8N6G2 289 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 RBM15BQ8NDT2 890 aaKnown RBP13.31□□□□□ -0.28
ECM1-202ENST00000369047 C2orf15Q8WU43 125 aaKnown RBP13.31□□□□□ -0.28
ECM1-202ENST00000369047 CMTM5Q96DZ9 223 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 ZNF419Q96HQ0 510 aaPredicted RBP13.31□□□□□ -0.28
ECM1-202ENST00000369047 DRC3Q9H069 523 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 RETREG1Q9H6L5 497 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 ATP13A1Q9HD20 1204 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.31□□□□□ -0.28
ECM1-202ENST00000369047 GMIPQ9P107 970 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.31□□□□□ -0.28
ECM1-202ENST00000369047 DNAJB4Q9UDY4 337 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 PLA2G4CQ9UP65 541 aa13.31□□□□□ -0.28
ECM1-202ENST00000369047 RUVBL2Q9Y230 463 aaKnown RBP13.31□□□□□ -0.28
ECM1-202ENST00000369047 A0A087X1B8 175 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 GOLGA8TH3BQL2 631 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 SLC35E2BP0CK96 405 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 ACRP10323 421 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 FGFR3P22607 806 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 GABRB3P28472 473 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 YBEYP58557 167 aaPredicted RBP13.3□□□□□ -0.28
ECM1-202ENST00000369047 POU4F1Q01851 419 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 ELAVL2Q12926 359 aaKnown RBP13.3□□□□□ -0.28
ECM1-202ENST00000369047 GPR17Q13304 367 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 FAM171A1Q5VUB5 890 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 GALNT7Q86SF2 657 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 TMEM151AQ8N4L1 468 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.3□□□□□ -0.28
ECM1-202ENST00000369047 DBF4BQ8NFT6 615 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 TTC8Q8TAM2 541 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 STYXQ8WUJ0 223 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 PDCD6IPQ8WUM4 868 aaKnown RBP13.3□□□□□ -0.28
ECM1-202ENST00000369047 STMN2Q93045 179 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 FBXO32Q969P5 355 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 RAP2CQ9Y3L5 183 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 PCDHB7Q9Y5E2 793 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 SCN5AQ14524 2016 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 DOCK4Q8N1I0 1966 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 ZBBXA8MT70 800 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 H7C4K7 107 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 CIB2O75838 187 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 ARNTP27540 789 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 ARRB2P32121 409 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 CD151P48509 253 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 SERPINH1P50454 418 aaKnown RBP13.3□□□□□ -0.28
ECM1-202ENST00000369047 USP46P62068 366 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 EFEMP1Q12805 493 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 LAMB3Q13751 1172 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 BTG3Q14201 252 aaPredicted RBP13.3□□□□□ -0.28
ECM1-202ENST00000369047 CNGA3Q16281 694 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 TRMT5Q32P41 509 aaKnown RBP13.3□□□□□ -0.28
ECM1-202ENST00000369047 PARP15Q460N3 678 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 CMPK2Q5EBM0 449 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 NEPROQ6NW34 567 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 MAVSQ7Z434 540 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 LMNTD2Q8IXW0 634 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 TDHQ8IZJ6 230 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 PHOSPHO2Q8TCD6 241 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 GATA5Q9BWX5 397 aaPredicted RBP13.3□□□□□ -0.28
ECM1-202ENST00000369047 COG4Q9H9E3 785 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 VTI1BQ9UEU0 232 aa13.3□□□□□ -0.28
ECM1-202ENST00000369047 FAM95CA0A1B0GW59 222 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 E2F8A0AVK6 867 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 VGLL3A8MV65 326 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.29□□□□□ -0.28
ECM1-202ENST00000369047 TARM1B6A8C7 271 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 ENPP3O14638 875 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 IGLV3-27P01718 113 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 GPR15P49685 360 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 RPL14P50914 215 aaKnown RBP13.29□□□□□ -0.28
ECM1-202ENST00000369047 MXRA7P84157 204 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 IL10RBQ08334 325 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 PRKAA1Q13131 559 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 CTBP1Q13363 440 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 UBAP2LQ14157 1087 aaKnown RBP13.29□□□□□ -0.28
ECM1-202ENST00000369047 GPNMBQ14956 572 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 KPNB1Q14974 876 aaKnown RBP13.29□□□□□ -0.28
ECM1-202ENST00000369047 SDHAF4Q5VUM1 108 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 NAPRTQ6XQN6 538 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 ATG14Q6ZNE5 492 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 ATAD1Q8NBU5 361 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 ACVR1CQ8NER5 493 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 HMCESQ96FZ2 354 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 SCYL1Q96KG9 808 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 CEP295NLQ96MC4 621 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms