RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 USP3Q9Y6I4 520 aa10.64□□□□□ -0.71
LYSMD1-201ENST00000368908 TRIP11Q15643 1979 aa10.64□□□□□ -0.71
LYSMD1-201ENST00000368908 FNDC1Q4ZHG4 1894 aaPredicted RBP10.64□□□□□ -0.71
LYSMD1-201ENST00000368908 ZCWPW2A0A1B0GU75 182 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 ZNF839A8K0R7 811 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 ADM5C9JUS6 153 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 TMX2-CTNND1H3BSU7 103 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 TK2O00142 265 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 JUNP05412 331 aaKnown RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 PRKCBP05771 671 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 PFKMP08237 780 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 GNAO1P09471 354 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 GSTT2P0CG29 244 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 GSTT2BP0CG30 244 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CCNA2P20248 432 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 JAK1P23458 1154 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 PSMB4P28070 264 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 HLCSP50747 726 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 NAGLUP54802 743 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 HSDL1Q3SXM5 330 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 ZDHHC17Q8IUH5 632 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CBR4Q8N4T8 237 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 OR13F1Q8NGS4 319 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 HMGCLL1Q8TB92 370 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CENPIQ92674 756 aaPredicted RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CDCA5Q96FF9 252 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 VPS39Q96JC1 886 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 FEM1CQ96JP0 617 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CCDC138Q96M89 665 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 HEXIM2Q96MH2 286 aaKnown RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 ZNF641Q96N77 438 aaPredicted RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 KCTD15Q96SI1 283 aaPredicted RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 HEPHQ9BQS7 1158 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 C11orf84Q9BUA3 381 aaPredicted RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 MROQ9BYG7 248 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 GPN2Q9H9Y4 310 aaPredicted RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 TRPC7Q9HCX4 862 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 AGPAT4Q9NRZ5 378 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 AP4E1Q9UPM8 1137 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CTDP1Q9Y5B0 961 aaPredicted RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 COL11A1P12107 1806 aaPredicted RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 MRASO14807 208 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 FOXD2O60548 495 aaPredicted RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 GRAP2O75791 330 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CLPXO76031 633 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 RASAL1O95294 804 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CAPGP40121 348 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CCR10P46092 362 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 POLD2P49005 469 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 EIF2B2P49770 351 aaKnown RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 ATP4BP51164 291 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 SNX16P57768 344 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 FKBP1BP68106 108 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 SP4Q02446 784 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 RALGDSQ12967 914 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 ITGA7Q13683 1181 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 FASTKQ14296 549 aaKnown RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 INPP5AQ14642 412 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 DLG2Q15700 870 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 DGKDQ16760 1214 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 DEPDC1Q5TB30 811 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 LRRC8EQ6NSJ5 796 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 KCTD8Q6ZWB6 473 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CPNE9Q8IYJ1 553 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 AFAP1L2Q8N4X5 818 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 SLC15A4Q8N697 577 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 KHSRPQ92945 711 aaKnown RBP eCLIP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 ROPN1LQ96C74 230 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 APBA2Q99767 749 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 CAB39LQ9H9S4 337 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 MAGEE1Q9HCI5 957 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 RNF146Q9NTX7 359 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 TLK1Q9UKI8 766 aa10.63□□□□□ -0.71
LYSMD1-201ENST00000368908 LOC285556D6RIA3 1793 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 IGKV6D-21A0A0A0MT36 114 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 SAC3D1A6NKF1 404 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 AQP9O43315 295 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 BCL10O95999 233 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 SNRPB2P08579 225 aaKnown RBP10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 KRT19P08727 400 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 FCGR1AP12314 374 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 S100A1P23297 94 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 SCNN1AP37088 669 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 DNAJB13P59910 316 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 C1QTNF8P60827 252 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 OXA1LQ15070 435 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 TMTC4Q5T4D3 741 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 SNRNP48Q6IEG0 339 aaKnown RBP10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 PRMT9Q6P2P2 845 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 PIWIL4Q7Z3Z4 852 aaKnown RBP10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 ZBTB8OSQ8IWT0 167 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 C1orf127Q8N9H9 656 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 RAB2BQ8WUD1 216 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 CANT1Q8WVQ1 401 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 RHOBTB2Q9BYZ6 727 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 C2orf40Q9H1Z8 148 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 ARMC7Q9H6L4 198 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 PTPRHQ9HD43 1115 aa10.62□□□□□ -0.71
LYSMD1-201ENST00000368908 BFARQ9NZS9 450 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms