RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 GPR27Q9NS67 375 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 NDFIP2Q9NV92 336 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 TMEM51Q9NW97 253 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 PPARGC1AQ9UBK2 798 aaKnown RBP10.52□□□□□ -0.73
CLRN3-201ENST00000368671 GGT7Q9UJ14 662 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 U3KQA8 63 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 SPTY2D1-AS1A0A0U1RR47 76 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 CPED1A4D0V7 1026 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 C16orf96A6NNT2 1141 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 F8VZ95 297 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 KRIT1O00522 736 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 AQP9O43315 295 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 AP1G1O43747 822 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 GFPT2O94808 682 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 ZIC2O95409 532 aaPredicted RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 GJB6O95452 261 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 GP1BAP07359 652 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 UCHL3P15374 230 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 NME1P15531 152 aaKnown RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 PCBP4P57723 403 aaKnown RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 TLE3Q04726 772 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 POLD3Q15054 466 aaPredicted RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 QPCTQ16769 361 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 DEFB133Q30KQ1 61 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 ARL13BQ3SXY8 428 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 C3orf38Q5JPI3 329 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 LRRC73Q5JTD7 316 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 TPRG1LQ5T0D9 272 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 ZCCHC8Q6NZY4 707 aaKnown RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 CRTC1Q6UUV9 634 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 EFL1Q7Z2Z2 1120 aaKnown RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 ZNF354CQ86Y25 554 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 FAM181AQ8N9Y4 354 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 JOSD2Q8TAC2 188 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 RXFP2Q8WXD0 754 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 ARHGEF2Q92974 986 aaKnown RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 ZNF578Q96N58 590 aaPredicted RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 KLF6Q99612 283 aaPredicted RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 C11orf70Q9BRQ4 267 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 STK33Q9BYT3 514 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 MAGEB5Q9BZ81 275 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 CLSTN2Q9H4D0 955 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 USP29Q9HBJ7 922 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 SAMSN1Q9NSI8 373 aaKnown RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 TAB2Q9NYJ8 693 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 OR12D3Q9UGF7 316 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 DACH1Q9UI36 760 aa10.51□□□□□ -0.73
CLRN3-201ENST00000368671 COL27A1Q8IZC6 1860 aaPredicted RBP10.51□□□□□ -0.73
CLRN3-201ENST00000368671 GOLGA4Q13439 2230 aaKnown RBP10.5□□□□□ -0.73
CLRN3-201ENST00000368671 TEX51A0A1B0GUA7 166 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 CFAP99D6REC4 459 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 FAM72CH0Y354 149 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 SPINT1O43278 529 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 TSPAN6O43657 245 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 C1QL1O75973 258 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 UGT2B4P06133 528 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 RHOQP17081 205 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 TGM2P21980 687 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 ERCC5P28715 1186 aaPredicted RBP10.5□□□□□ -0.73
CLRN3-201ENST00000368671 SDC4P31431 198 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 ADRA1BP35368 520 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 ETFBP38117 255 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 MAPKAPK2P49137 400 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 GEMIN4P57678 1058 aaKnown RBP10.5□□□□□ -0.73
CLRN3-201ENST00000368671 SNRPD1P62314 119 aaKnown RBP10.5□□□□□ -0.73
CLRN3-201ENST00000368671 EIF2B5Q13144 721 aaKnown RBP10.5□□□□□ -0.73
CLRN3-201ENST00000368671 C1orf61Q13536 156 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 CCDC14Q49A88 953 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 ZNF805Q5CZA5 627 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 ATXN7L2Q5T6C5 722 aaPredicted RBP10.5□□□□□ -0.73
CLRN3-201ENST00000368671 FAM72AQ5TYM5 149 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 MANEALQ5VSG8 457 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 BROXQ5VW32 411 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 FAM72DQ6L9T8 149 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 GUSBP11Q6P575 273 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 ARCQ7LC44 396 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 VPS36Q86VN1 386 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 ZSCAN30Q86W11 494 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 FAM72BQ86X60 149 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 RBFAQ8N0V3 343 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 LSMEM2Q8N112 164 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 CCDC185Q8N715 623 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 OR2AP1Q8NGE2 309 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 SLC30A5Q8TAD4 765 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 GPT2Q8TD30 523 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 RAB7BQ96AH8 199 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 ISG20Q96AZ6 181 aaKnown RBP10.5□□□□□ -0.73
CLRN3-201ENST00000368671 TBC1D31Q96DN5 1066 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 KLHL32Q96NJ5 620 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 LENG8Q96PV6 779 aaPredicted RBP10.5□□□□□ -0.73
CLRN3-201ENST00000368671 IL12RB2Q99665 862 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 C1QTNF2Q9BXJ5 285 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 SYNDIG1Q9H7V2 258 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 POLR1BQ9H9Y6 1135 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 TMEM248Q9NWD8 314 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 APOBEC3BQ9UH17 382 aaKnown RBP10.5□□□□□ -0.73
CLRN3-201ENST00000368671 KLF15Q9UIH9 416 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 NOCTQ9UK39 431 aaKnown RBP10.5□□□□□ -0.73
CLRN3-201ENST00000368671 HPCAL4Q9UM19 191 aa10.5□□□□□ -0.73
CLRN3-201ENST00000368671 URB1O60287 2271 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms