RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 GOT1P17174 413 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 CES3Q6UWW8 571 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 CSPG4P5Q96PW8 444 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 KIF13BQ9NQT8 1826 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 WTIPA6NIX2 430 aaPredicted RBP11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 KLRC2P26717 231 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 FSCN1Q16658 493 aaKnown RBP11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 TTC30BQ8N4P2 665 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 CELF6Q96J87 481 aaKnown RBP11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 MECRQ9BV79 373 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 TKTL2Q9H0I9 626 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 AHSPQ9NZD4 102 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 RNF181Q9P0P0 153 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 AZIN1O14977 448 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 BANF1O75531 89 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 PGM3O95394 542 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 PPP3CCP48454 512 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 SEPT8Q92599 483 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 SH3GLB1Q9Y371 365 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 F8W810 466 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 HS6ST1O60243 411 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 CDC25CP30307 473 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 CNTN2Q02246 1040 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 INTS11Q5TA45 600 aaKnown RBP11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 UNC93B1Q9H1C4 597 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 ALG9Q9H6U8 611 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 FAM220BPB1ANY3 271 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 TAL1P17542 331 aaPredicted RBP11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 LGMNQ99538 433 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 SEMA6AQ9H2E6 1030 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 ECM29Q5VYK3 1845 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 AVILO75366 819 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 RPL3P39023 403 aaKnown RBP11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 FASTKD3Q14CZ7 662 aaKnown RBP11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 INAQ16352 499 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 METTL3Q86U44 580 aaKnown RBP11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 CTSHP09668 335 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 EVX2Q03828 476 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 LRRC74AQ0VAA2 488 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 TRAP1Q12931 704 aaKnown RBP11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 LY6KQ17RY6 165 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 MGAT5BQ3V5L5 792 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 AFTPHQ6ULP2 937 aa11.9□□□□□ -0.5
CDC42BPA-202ENST00000366764 RBM47A0AV96 593 aaKnown RBP11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 CDH3P22223 829 aa11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 OR1E1P30953 314 aa11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 NDUFA5Q16718 116 aa11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 MIB1Q86YT6 1006 aa11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 CCNE2O96020 404 aa11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 TPH1P17752 444 aa11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 S100A3P33764 101 aa11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 MRPS5P82675 430 aaKnown RBP11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 TRIM25Q14258 630 aaKnown RBP11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 IQSEC1Q6DN90 963 aa11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 TSR3Q9UJK0 312 aaKnown RBP11.9□□□□□ -0.51
CDC42BPA-202ENST00000366764 TRPM3Q9HCF6 1732 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 FAM25AB3EWG3 89 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 FAM25CB3EWG5 89 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 FAM25GB3EWG6 89 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 ST8SIA6P61647 398 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 TRAF3Q13114 568 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 TAF1CQ15572 869 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 FNBP1LQ5T0N5 605 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 NBPF12Q5TAG4 269 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 NKX2-3Q8TAU0 364 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 PHF21AQ96BD5 680 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 HGH1Q9BTY7 390 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 POLR1BQ9H9Y6 1135 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 PLA2G4CQ9UP65 541 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 NCF1BA6NI72 391 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 NCF1CA8MVU1 366 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 USP17L7P0C7H9 530 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 NCF1P14598 390 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC2A4P14672 509 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 BFSP2Q13515 415 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZC3H12AQ5D1E8 599 aaKnown RBP11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 ARMC3Q5W041 872 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 AHI1Q8N157 1196 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 PACRGLQ8N7B6 248 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 P2RY11Q96G91 374 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 CEP41Q9BYV8 373 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 GBA3Q9H227 469 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 XPR1Q9UBH6 696 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 EPN2O95208 641 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 AOC1P19801 751 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZNF846Q147U1 533 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 DEPDC4Q8N2C3 294 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 CD101Q93033 1021 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 C19orf60Q96EN9 201 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 OPTCQ9UBM4 332 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 TRAF6Q9Y4K3 522 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 GNG14A0A1W2PPG7 69 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 ICAM3P32942 547 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 GRM5P41594 1212 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 LYPLAL1Q5VWZ2 237 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 KRT84Q9NSB2 600 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 BTN3A1O00481 513 aa11.89□□□□□ -0.51
CDC42BPA-202ENST00000366764 PDE9AO76083 593 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms