RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PRSS33Q8NF86 280 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 IL17RDQ8NFM7 739 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 HASPINQ8TF76 798 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 C18orf25Q96B23 403 aaPredicted RBP8.27□□□□□ -1.09
YBX3-204ENST00000366290 ACCSQ96QU6 501 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 MED15Q96RN5 788 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 CBWD1Q9BRT8 395 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 MSTO1Q9BUK6 570 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 ASB7Q9H672 318 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 RPF1Q9H9Y2 349 aaKnown RBP8.27□□□□□ -1.09
YBX3-204ENST00000366290 SARS2Q9NP81 518 aaKnown RBP8.27□□□□□ -1.09
YBX3-204ENST00000366290 RMND1Q9NWS8 449 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 ZDHHC7Q9NXF8 308 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 FBXW11Q9UKB1 542 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 UBQLN1Q9UMX0 589 aaKnown RBP8.27□□□□□ -1.09
YBX3-204ENST00000366290 EXOC7Q9UPT5 735 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 C2CD2Q9Y426 696 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 NOTCH4Q99466 2003 aa8.27□□□□□ -1.09
YBX3-204ENST00000366290 A0A1W2PPL8 197 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 LACTBL1A8MY62 500 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 PHGDHO43175 533 aaKnown RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 FOXS1O43638 330 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 HARSP12081 509 aaKnown RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 PTMSP20962 102 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 HOXA9P31269 272 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 CA8P35219 290 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 PIK3CGP48736 1102 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 TCF15Q12870 199 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 POLD3Q15054 466 aaPredicted RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 PSMD5Q16401 504 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 DPCR1Q3MIW9 517 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 RARS2Q5T160 578 aaKnown RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 SPATA1Q5VX52 437 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 CENPPQ6IPU0 288 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 PRSS55Q6UWB4 352 aaPredicted RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 CRELD2Q6UXH1 353 aaPredicted RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 STXBP4Q6ZWJ1 553 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 LIMS2Q7Z4I7 341 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 C12orf56Q8IXR9 622 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 ADSSL1Q8N142 457 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 CELF5Q8N6W0 485 aaKnown RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 C12orf76Q8N812 135 aaPredicted RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 TRIML1Q8N9V2 468 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 ST8SIA2Q92186 375 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 TFAP2CQ92754 450 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 CCDC47Q96A33 483 aaKnown RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 ZNF707Q96C28 371 aaPredicted RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 FUCA2Q9BTY2 467 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 APOL5Q9BWW9 433 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 PACSIN1Q9BY11 444 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 POMKQ9H5K3 350 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 TMEM206Q9H813 350 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 AGPAT3Q9NRZ7 376 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 HECAQ9UBI9 543 aaPredicted RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 TUBGCP4Q9UGJ1 667 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 CDH22Q9UJ99 828 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 AGO2Q9UKV8 859 aaKnown RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 MAFFQ9ULX9 164 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 ZFHX2Q9C0A1 2572 aaPredicted RBP8.26□□□□□ -1.09
YBX3-204ENST00000366290 NCANO14594 1321 aa8.26□□□□□ -1.09
YBX3-204ENST00000366290 TSC2P49815 1807 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 TRIM49BA6NDI0 452 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 PRR5-ARHGAP8B1AHC4 643 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 PIRO00625 290 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 PDXKO00764 312 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 CLIC2O15247 247 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 ADAM12O43184 909 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 RFPL2O75678 378 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 IPO13O94829 963 aaKnown RBP8.25□□□□□ -1.09
YBX3-204ENST00000366290 OAZ2O95190 189 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 IL18RAPO95256 599 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 AHSGP02765 367 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 HNRNPA1P09651 372 aaKnown RBP eCLIP8.25□□□□□ -1.09
YBX3-204ENST00000366290 RPL17P18621 184 aaKnown RBP8.25□□□□□ -1.09
YBX3-204ENST00000366290 TKTP29401 623 aaKnown RBP8.25□□□□□ -1.09
YBX3-204ENST00000366290 SLC6A4P31645 630 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 OR1D2P34982 312 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 MATR3P43243 847 aaKnown RBP eCLIP8.25□□□□□ -1.09
YBX3-204ENST00000366290 BRCC3P46736 316 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 SNRPFP62306 86 aaKnown RBP8.25□□□□□ -1.09
YBX3-204ENST00000366290 ZXDAP98168 799 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 CSRP2Q16527 193 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 KHDC1LQ5JSQ8 128 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 ATXN7L2Q5T6C5 722 aaPredicted RBP8.25□□□□□ -1.09
YBX3-204ENST00000366290 POLNQ7Z5Q5 900 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 C11orf96Q7Z7L8 435 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 ZC3H3Q8IXZ2 948 aaKnown RBP8.25□□□□□ -1.09
YBX3-204ENST00000366290 SYCP3Q8IZU3 236 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 MDGA1Q8NFP4 955 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 ZFP28Q8NHY6 868 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 ZNF461Q8TAF7 563 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 TMEM174Q8WUU8 243 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 POMGNT1Q8WZA1 660 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 RPGRIP1Q96KN7 1286 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 CPEB1Q9BZB8 566 aaKnown RBP8.25□□□□□ -1.09
YBX3-204ENST00000366290 WDR6Q9NNW5 1121 aaKnown RBP8.25□□□□□ -1.09
YBX3-204ENST00000366290 SLAMF7Q9NQ25 335 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 DMAC2Q9NW81 257 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 TRAF3IP3Q9Y228 551 aa8.25□□□□□ -1.09
YBX3-204ENST00000366290 KMT2EQ8IZD2 1858 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms