RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 PPEF2O14830 753 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 CLDN3O15551 220 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 NDUFA10O95299 355 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 VNN2O95498 520 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 CLTAP09496 248 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 PLA2G4BP0C869 781 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 CHRNB1P11230 501 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 TDGF1P13385 188 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 TGM1P22735 817 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 U2AF2P26368 475 aaKnown RBP eCLIP5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 ZFP36P26651 326 aaKnown RBP5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 PCSK1P29120 753 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 HOXC13P31276 330 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 AVPR1BP47901 424 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 SATB1Q01826 763 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 MCL1Q07820 350 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 DMWDQ09019 674 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 SRSF5Q13243 272 aaKnown RBP5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 DHX8Q14562 1220 aaKnown RBP5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 LAIR1Q6GTX8 287 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 DSTYKQ6XUX3 929 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 MED25Q71SY5 747 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 USP37Q86T82 979 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 TMC8Q8IU68 726 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 MFSD6LQ8IWD5 586 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 RHOT1Q8IXI2 618 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 YAF2Q8IY57 180 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 ATAD1Q8NBU5 361 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 CPEB3Q8NE35 698 aaKnown RBP5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 CSGALNACT1Q8TDX6 532 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 DEPDC1BQ8WUY9 529 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 NRG4Q8WWG1 115 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 JADE3Q92613 823 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 FAXDC2Q96IV6 333 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 ZFYVE19Q96K21 471 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 ZSCAN31Q96LW9 406 aaPredicted RBP5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 NTPCRQ9BSD7 190 aaKnown RBP5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 C17orf75Q9HAS0 396 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 TDP1Q9NUW8 608 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 RAB23Q9ULC3 237 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 ACTL7AQ9Y615 435 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 F5P12259 2224 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 NUP210Q8TEM1 1887 aaPredicted RBP5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 ATG2BQ96BY7 2078 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 SCN1AP35498 2009 aa5.57□□□□□ -1.52
RNU4-4P-201ENST00000364588 MTMR11A4FU01 709 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 VWA3AA6NCI4 1184 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 OR6C75A6NL08 312 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 LACTBL1A8MY62 500 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 M0QZQ0 153 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 LAD1O00515 517 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 HNRNPDLO14979 420 aaKnown RBP5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 ZNF185O15231 689 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 SGTAO43765 313 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 KATNA1O75449 491 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 OAZ2O95190 189 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 CFIP05156 583 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 DDCP20711 480 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 FPR1P21462 350 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 GABRR2P28476 465 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 LRPAP1P30533 357 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 PRPHP41219 470 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 CXCL12P48061 93 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 LIG4P49917 911 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 CCR3P51677 355 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 SLC12A3P55017 1021 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 ARHGAP8P85298 464 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 GPR17Q13304 367 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 SIM2Q14190 667 aaPredicted RBP5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 ZBTB6Q15916 424 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 SPDYE7PQ495Y7 208 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 CRB2Q5IJ48 1285 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 HYIQ5T013 277 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 CENPPQ6IPU0 288 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 Q6ZPA2 131 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 Q6ZS52 159 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 HAUS6Q7Z4H7 955 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 DNAJB7Q7Z6W7 309 aaPredicted RBP5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 ARID3BQ8IVW6 561 aaPredicted RBP5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 PPM1NQ8N819 430 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 SYT2Q8N9I0 419 aaPredicted RBP5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 LEMD2Q8NC56 503 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 BEST2Q8NFU1 509 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 OR2I1PQ8NGU4 316 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 CDK5RAP3Q96JB5 506 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 SENP8Q96LD8 212 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 LRRC3BQ96PB8 259 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 NEU1Q99519 415 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 REEP2Q9BRK0 252 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 TIPINQ9BVW5 301 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 BRINP2Q9C0B6 783 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 GPR88Q9GZN0 384 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 C11orf54Q9H0W9 315 aaPredicted RBP5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 ZHX3Q9H4I2 956 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 RPF1Q9H9Y2 349 aaKnown RBP5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 PLEKHA5Q9HAU0 1116 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 TRPV4Q9HBA0 871 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 PCDH12Q9NPG4 1184 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 TRPV5Q9NQA5 729 aa5.56□□□□□ -1.52
RNU4-4P-201ENST00000364588 KLHL11Q9NVR0 708 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms