RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 FAM131CQ96AQ9 280 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 ZNF419Q96HQ0 510 aaPredicted RBP14□□□□□ -0.17
NSMCE1-201ENST00000361439 TUBB2BQ9BVA1 445 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 HDAC8Q9BY41 377 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 PABPC3Q9H361 631 aaKnown RBP14□□□□□ -0.17
NSMCE1-201ENST00000361439 ZDHHC6Q9H6R6 413 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 SCUBE2Q9NQ36 999 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 DYRK4Q9NR20 520 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 POLR3BQ9NW08 1133 aaPredicted RBP14□□□□□ -0.17
NSMCE1-201ENST00000361439 SEPT10Q9P0V9 454 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 DKK3Q9UBP4 350 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 FEZ2Q9UHY8 353 aaPredicted RBP14□□□□□ -0.17
NSMCE1-201ENST00000361439 DNPEPQ9ULA0 475 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 FZD4Q9ULV1 537 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 NCKAP1Q9Y2A7 1128 aa14□□□□□ -0.17
NSMCE1-201ENST00000361439 RNF103O00237 685 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 FANCGO15287 622 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 KCNN4O15554 427 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 GCATO75600 419 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 HLA-DQB2P05538 268 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 SERPINF2P08697 491 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 PAFAH1B1P43034 410 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 TPMTP51580 245 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 POLR2LP62875 67 aaKnown RBP13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 BCL2L1Q07817 233 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 ITKQ08881 620 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 CYP1B1Q16678 543 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 ARSIQ5FYB1 569 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 NCEH1Q6PIU2 408 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 BRAT1Q6PJG6 821 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 ZC3H14Q6PJT7 736 aaKnown RBP13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 C4orf22Q6V702 233 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 GDPD4Q6W3E5 623 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 CREG2Q8IUH2 290 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 CNTD1Q8N815 330 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 CHST14Q8NCH0 376 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 ZBTB44Q8NCP5 570 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 C1orf54Q8WWF1 131 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 RAB7BQ96AH8 199 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 VOPP1Q96AW1 172 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 SPACA7Q96KW9 195 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 SPATA13Q96N96 652 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 SLC25A51Q9H1U9 297 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 KDM4CQ9H3R0 1056 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 SUV39H2Q9H5I1 410 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 SGK2Q9HBY8 427 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 VPS45Q9NRW7 570 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 EVLQ9UI08 416 aaPredicted RBP13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 SARDHQ9UL12 918 aa13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 TPX2Q9ULW0 747 aaKnown RBP13.99□□□□□ -0.17
NSMCE1-201ENST00000361439 TSPAN11A1L157 253 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 KPNA3O00505 521 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 TRAFD1O14545 582 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 ZNF185O15231 689 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 MID1O15344 667 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 HTRA2O43464 458 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 NFKBIAP25963 317 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 ACTN2P35609 894 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 P2RY2P41231 377 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 RGRP47804 291 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 PSMD8P48556 350 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 P3H1Q32P28 736 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 SPDYCQ5MJ68 293 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 KIAA1324Q6UXG2 1013 aaKnown RBP13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 ADAT2Q7Z6V5 191 aaKnown RBP13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 ZNF567Q8N184 647 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 PRELID2Q8N945 189 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 ATL2Q8NHH9 583 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 ARRDC2Q8TBH0 407 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 GRIN3AQ8TCU5 1115 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 ATG4AQ8WYN0 398 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 ECHDC3Q96DC8 303 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 IMP4Q96G21 291 aaKnown RBP13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 MS4A14Q96JA4 679 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 EXOC2Q96KP1 924 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 RUNDC3BQ96NL0 473 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 AGAP3Q96P47 875 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 FCRL5Q96RD9 977 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 OMDQ99983 421 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 SEMA3CQ99985 751 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 PCED1AQ9H1Q7 454 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 NOD2Q9HC29 1040 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 GLOD4Q9HC38 313 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 FBXL12Q9NXK8 326 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 KLHL8Q9P2G9 620 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 ZNF148Q9UQR1 794 aa13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 ARIH1Q9Y4X5 557 aaPredicted RBP13.98□□□□□ -0.17
NSMCE1-201ENST00000361439 CACNA1HO95180 2353 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 UGT2B4P06133 528 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 FNTAP49354 379 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 NEK3P51956 506 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 MAXP61244 160 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 RPL26P61254 145 aaKnown RBP13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 MAP7D1Q3KQU3 841 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 ANKRD20A2Q5SQ80 823 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 ANKRD20A1Q5TYW2 823 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 ANKRD20A3Q5VUR7 823 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 TSSK4Q6SA08 328 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 SLC36A4Q6YBV0 504 aa13.97□□□□□ -0.17
NSMCE1-201ENST00000361439 ERN2Q76MJ5 926 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms